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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG6370-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLGLVIFC VLVASGPTWS ARTVDSHLGQ KDLSRLQKVF VDGFGSSDLQ SIFFSSLNIQ  60
   61 LTDATQKEPL CKKIATLHSE SKLNSFEKDY YYIGASRNLG CSAKIDEGLL SKVYSSLNSE 120
  121 LGSSQEIFYR VVTHKVLGVE INEATQEKLV KRLQELLKKD DTLSGLGYAF NVAPLLGASA 180
  181 SFIANRVEDA IVQADEVDGK LLQFEGGLSI TSLIINGAFG VSKTFNKPVP ITADQAVKFA 240
  241 NYFLSRRSVQ TAKGAHVLIE ALKTISGADK IAPVCVQLIG NGQLDAQSPT LNVAVVDLLG 300
  301 KPLSPAPKVI NAKVIRKKDS SVLADKITVA SKSSDKTTYV ADLASLKPAR GVYQAELSAD 360
  361 GVYTQTLQFK VLGRVKVQSL EVGIAESDAS AATRKQSVTY PGKLQEVLSA DSTQKLLLKA 420
  421 VLVDESTSKP LAVHQAFVRL YNKKTDKEII FVAEQDSSKA YKFDMDVGNN GKNFNYQSGT 480
  481 YSIYLTVGDS SLSNSFEWLV AEVQLKFNED KEVKPKNTSG PLPEIIHQFR VPDKRPPRIV 540
  541 SDIFTGLCIT PLVLLFVFWG KLGINVSNLT LAPSTIGFHL GFGGILVLFF VFWLQLNMFQ 600
  601 TLRLLIPIAV FTFLAGNRLL RRLYAQRNSK ASAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle