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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG6550-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHLGQDLPG NDVDDIEDLI SADDVKPRER YENKKTVTVR AKKRSQIRLE SQEEEEKPKP  60
   61 TIHESVIPGT QKVFVKTWGC AHNNSDSEYM AGQLAAYGYR LSGKEEADLW LLNSCTVKNP 120
  121 SEDTFRNEIE SGMRNGKHVV VAGCVPQGAP KSDYLNGLSV IGVQQIDRVV EVVEETLKGH 180
  181 SVQLLQNKKK VHGRRVAGAP LSLPKVRKNP LIEIISINSG CLNQCTYCKT KHARGDLASY 240
  241 PPEEVVERAR QSFAEGCCEI WLTSEDTGAY GRDIGSSLPE LLWQLVEVIP EHCMLRVGMT 300
  301 NPPYILEHLE EVANVLQHPR VYSFLHVPVQ SGSDSVLGEM KREYCRQDFE HVVDFLRERV 360
  361 PGVTIATDII CGFPTETEDD FEETMTLCAK YRFPSLFINQ FFPRPGTPAA KMDRIPANLV 420
  421 KKRTKRLTDL FYSYEPYADR VGEIYTVLVT EVSHDKLHYV GHNKSYEQVL LPMRDNLLGT 480
  481 RVHVRITSAS KFSMVGEILD DERDWTRCAK NQELPNVQVQ TRSRERLIQR YFGIALVLGS 540
  541 LAFLIQLVVR LL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle