YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG15611-PA
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSLFTLNL FDVVSVVLTF LVIFLVQILN VYLHILDDNA DNGKSIDVVD KAPAKECPLL  60
   61 ESQSPSSPIA TTLPKSQASS NGKLEKQISL LDSDSGISLS SINTCSTTAA NSSPTYRAPN 120
  121 GFHSFPSHTL SFETLGDEYH EDEDTLSLEN LFPCDQTEIY ASKKISFIID ELIQTEVNYV 180
  181 NNLKKGMLNY GQLKDVEDLP EALSGETKQK MLLGNIKEIL ELHEKEILPL MLRNQRDLKG 240
  241 LFDEFAAHFE KNSFYCYVSF TMGKKSSMQL RQDNRLWLQT YQTQIKDKLG IDSFLVQPIQ 300
  301 RLTRYPLLLQ QFISEFYKSG ISCKPVLTAV CKLETRMRRA LDVVNQAEEI PNIEELNELD 360
  361 VLQLGNFRRA TEFDAQHFPT RKKYRSKVFL FDRCLVCTEV RKKRLAYRQH YNWEHVELQR 420
  421 PLDSVSSNAN KIINLLVKQE EGGSSVGSKR EEYSFMAAEA SVVKQWLQAT HKIIEIARNE 480
  481 HARRNTFSLP MDLVLGVVLA IWLIWQYL

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.58
Transmembrane Helix	8	34	0.71
Cytoplasmic	35	485	0.61
Transmembrane Helix	486	505	0.84
Non-Cytoplasmic	506	508	0.61