YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG15611-PB
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSLFTLNL FDVVSVVLTF LVIFLVQILN VYLHILDDNA DNGKSIDVVD KAPAKECPLL  60
   61 ESQSPSSPIA TTLPKSQASS NGKLEKQISL LDSDSHEDED TLSLENLFPC DQTEIYASKK 120
  121 ISFIIDELIQ TEVNYVNNLK KGMLNYGQLK DVEDLPEALS GETKQKMLLG NIKEILELHE 180
  181 KEILPLMLRN QRDLKGLFDE FAAHFEKNSF YCYVSFTMGK KSSMQLRQDN RLWLQTYQTQ 240
  241 IKDKLGIDSF LVQPIQRLTR YPLLLQQFIS EFYKSGISCK PVLTAVCKLE TRMRRALDVV 300
  301 NQAEEIPNIE ELNELDVLQL GNFRRATEFD AQHFPTRKKY RSKVFLFDRC LVCTEVRKKR 360
  361 LAYRQHYNWE HVELQRPLDS VSSNANKIIN LLVKQEEGGS SVGSKREEYS FMAAEASVVK 420
  421 QWLQATHKII EIARNEHARR NTFSLPMDLV LGVVLAIWLI WQYL

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.65
Transmembrane Helix	8	34	0.72
Cytoplasmic	35	441	0.69
Transmembrane Helix	442	461	0.86
Non-Cytoplasmic	462	464	0.65