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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: inaC-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAVATPG ATVLPPSVPS AAPGAKAPAA GAGKGPGNLL EITGEANIVN YMKNRLRKGA  60
   61 MKRKGLEMVN GHRFGVRFFK NPTYCGHCKD FIWGFGKQGF QCEECRFNIH QKCCKFVVFK 120
  121 CPGKDTDFDA DCAKVKHGWI STTYTTPTFC DECGLLLHGV AHQGVKCENC NLNVHHACQE 180
  181 TVPPMCGADI SEVRGKLLLY VELKGNNLKV DIKEAANLIP MDTNGFSDPY IAVQMHPDRS 240
  241 GRTKKKTKTI QKNLNPVFNE TFTFELQPQD RDKRLLIEVW DWDRTSRNDF MGSFSFSLEE 300
  301 LQKEPVDGWY KFLSQVEGEH YNIPCVDAFN DIARLRDEVR HDRRPNEKRR MDNKDMPHNM 360
  361 SKRDMIRAAD FNFVKVIGKG SFGKVLLAER RGTDELYAVK VLRKDVIIQT DDMELPMNEK 420
  421 KILALSGRPP FLVSMHSCFQ TMDRLFFVME YCKGGDLMYH MQQYGRFKES VAIFYAVEVA 480
  481 IALFFLHERD IIYRDLKLDN ILLDGEGHVK LVDFGLSKEG VTERQTTRTF CGTPNYMAPE 540
  541 IVSYDPYSIA ADWWSFGVLL FEFMAGQAPF EGDDETTVFR NIKDKKAVFP KHFSVEAMDI 600
  601 ITSFLTKKPN NRLGAGRYAR QEITTHPFFR NVDWDKAEAC EMEPPIKPMI KHRKDISNFD 660
  661 DAFTKEKTDL TPTDKLFMMN LDQNDFIGFS FMNPEFITII 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle