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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Atg9-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPHINYRS LAEEAASPFL EHHPSTGQGP SKTQDAKANA AAAHLDPLGE HGLEQPLDEH  60
   61 DTEHEGEDTP RNSGVMIHMV PETGRARWNH IEDLDSFFSR MYQYQQKHGF TVIVVDEMLQ 120
  121 VLEFGFVVWL LAFVMHCVRF DVLFGDTPPG GLNPNKTTLS DVMYPTGECL ANFTWVTYLV 180
  181 VFIAAIYLGI RLLKMVYHIT QYADIKRFYN SALHIEDSDL DNFTWHEVQQ RIRRVQAEQH 240
  241 MCIDKESLTE LDIYHRVLRF KNYLVALMNK QLLPVRFHIP LYGEVVSLSR GMLFNIDFIL 300
  301 FRGPGSPFQN NWQLRDEFAV RSNQTELAQR LSKLILGVAL LNLVLAPVIF VWQLIYFSFS 360
  361 YANILRKEPG ALGLRTWSNY GRLYLRHFNE LDHELDARLN RAYDYADRYL NSFSSPLAAV 420
  421 IAKNLLFISG GLLLLILALG IYEEHVFQVE HLLAILAGLG AIGVVCRTLI PDENLVWCPE 480
  481 QLMTAILAHV HYLPSEWRQQ AHTTKVRQEF SNFFQFKAGY LLSEIFSPFV TPFVLIFVFR 540
  541 PKAIELVRFF RTFTVSVRGV GNVCSFAQMD VRKHGNPDWQ LTSELEEMTR ATAQQPQQEP 600
  601 QQQSLAGGKT EMSLLRFTLN NPEWQMPKEA KQFLRGVREH AVGELVQAKT SMVQENPLTN 660
  661 SLISFGTMGA DYCSIANSVL TAQVTPQQLE ISQSLRPGLG PVSGGFPVAA SDFRQMLQQN 720
  721 LSASVGPLDS MRRLRLSRAE GRLEGPTDTL LYGLCGVDPR VGSTPLNVGV ADMCLSALYL 780
  781 HELNQQKRQA RQSRIDEAED ERPGTSHWPP RPPAAPSADT GFGSRHTVIT SKAAESTPLL 840
  841 GSIRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle