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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Dg-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFQWFLSAS ASLSLFLLLD FVVWIHGERD FNVNDSQVPV IEPKDVPAYK QDPYVTELMS  60
   61 CQNTPSEIVL SLLLKKHDWS ELTATKRAHV QAKLAKFFAI PKEFISLDSV SKRELRSMHK 120
  121 LAMRKGGKGN KNIETLNRRL GRASFMIGCG PSYFVMGEPI AKQIAHQMKD GTIGALTEEN 180
  181 FGLWFIWRKE LKSRSNRKRR QSEGSGADED DYDYGDDDEE VAEPSTEVPP VTTHAHRHHH 240
  241 GAPNTVLNEL ELSTQLPIDD FEGTATATQP TGTATATAIA STAAAAAATA AAATATATTA 300
  301 NASATTAGES EFHIESTTHR TISSKEGGEP DAISSGNNSL ANNELSTPAT PTSSVATTTA 360
  361 STPESSSISS NFVSTDYMEP QPEENSPPII KTRLQKLAVT SGKAFTFHVL PETFYDAEDQ 420
  421 GNLRLALTDK DGHELKANSW LQFNADKREL YGLPLDDTVS RWQYRLSATD SGNASVTETV 480
  481 EISVQQHRAV RTINHEISVF VRINEKPGHN IDWQLKLINA VARTLDDSTN SAVVVREIRQ 540
  541 TPHDPHSATF VYFNETLPTS ECPEKELKDI IARLDANRLS DLVQPQLGIK SITGQLIGSC 600
  601 QKDLTQVKPT QHMTKNVPPM PRNQVDRVNA SLGQLLVYKV PADTFYDAND NQLTLTLKTR 660
  661 DHLELSPRHW LQFDSKNEEF YGIPKSGDIG SEEYLLVAED SGGLSAHDAL VVVVSPAPKR 720
  721 DFGFFFKAYL SIKHERFNAD LQRKFVERVA KLNGDPTTGQ IQIRSITTHH DSDGTIVNFY 780
  781 NTTLYRKHNS CREKEVAMTR SVYLNSDLSL REAAKRALGP ELNLTNFSVV PFSICHHTEN 840
  841 IDTNQLDYIP SRPEEPTHKS SFGEDYMITF VWPIVIIVAM LVAASIIACC LHWCRQRSGK 900
  901 MELGDEEERK SFRAKGIPVI FQDEYEEKPE IGNKSPVILK DEKPPLLPPS YNTSNMNGDN 960
  961 DVDDYVPPPS VVVGGREVRG KSPATPSYRK PPPYVSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle