YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Gpo-1-PD, Gpo-1-...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRMFKFGV TAASACVGSV LASYTLDRWN TPHVVNNATV PPKRKRTLPP RADQIKSLMS  60
   61 GEEFDVLIIG GGATGAGCAL DSVTRGLKTA LVELDDFASG TSSRSTKLIH GGVRYLQKAI 120
  121 LGLDLEQYRM VKEALAERAT MLESAPHLTH PLPIMLPVYT WWQVPYYWVG IKAYDLVAGD 180
  181 RNVKSSYYLS KKDALELFPM LKKDKLCGAI VYYDGQQDDA RMCLAVALTA ARHGATVCNH 240
  241 VEVKELLKKD DGTGKQVLCG AKVKDHISGK EFTVKAKCIV NAAGPFTDSI RKMDNPTVKS 300
  301 ICCPSSGVHI VLPGYYSPDQ MGLLDPSTSD GRVIFFLPWQ RQTIAGTTDL PCEITHNPTP 360
  361 TEDEIQFILN EIKNYLNADV EVRRGDVLSA WSGIRPLVSD PNKDDTQSLA RNHIVHVSPS 420
  421 NLITIAGGKW TTYRAMAEHT IDAAIKACNL KPERAEAVTS YLKIEGGQGW TPTMYIRLVQ 480
  481 DFGLECEVAQ HLAKSYGDRA FAVSKMASLT GKRWPIIGNR IHPEFPYIDA EIRYGVREYA 540
  541 CTAVDMIARR LRLAFLNVQA AQEALPVIVD IMGEELGWSK DEKERQIKHA TEFLANEMGH 600
  601 SVNRTSKERI PIKLSKEEIQ TYIKRFQLID KDKKGYVSIN DIRRALKSFG DGDVSGEQLH 660
  661 EILREIDTNM NGQVELDEYL QMMSAIKTGD VAYSRFARMA ELEEQKHEAA NLKQISVDRS 720
  721 GGGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle