YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0300975, CG8...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	45	0.99
Transmembrane Helix	46	68	0.89
Non-Cytoplasmic	69	86	0.93
Transmembrane Helix	87	109	0.92
Cytoplasmic	110	117	0.89
Transmembrane Helix	118	136	0.93
Non-Cytoplasmic	137	146	0.81
Transmembrane Helix	147	169	0.87
Cytoplasmic	170	179	0.86
Transmembrane Helix	180	201	0.93
Non-Cytoplasmic	202	208	0.82
Transmembrane Helix	209	229	0.94
Cytoplasmic	230	299	0.97
Transmembrane Helix	300	323	0.86
Non-Cytoplasmic	324	334	0.74
Transmembrane Helix	335	357	0.85
Cytoplasmic	358	364	0.89
Transmembrane Helix	365	386	0.90
Non-Cytoplasmic	387	393	0.87
Transmembrane Helix	394	417	0.89
Cytoplasmic	418	428	0.84
Transmembrane Helix	429	450	0.89
Non-Cytoplasmic	451	456	0.85
Transmembrane Helix	457	481	0.87
Cytoplasmic	482	521	0.99

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEQHQNLNQ NGSESNGKQA RIVSGLDRLL KTPPPGEQTR AVRRQVIAVI LANVGVFSTG  60
   61 MTLAMPTATL HQLKDTTEPV HLNDSQASWF ASVNALSAPI GGLLSGFLLD RIGRKKSLIV 120
  121 LNVLIILAWI LLATPSESDQ NAFFWQLIVS RFMLGVGMGL ASAPPGVYAA EISVPKTRGS 180
  181 LILGTSISVA GGITILYGIG YCIRDDFRLI ALICCGYQLV ALLCVLPLPE SHCWLLSKKR 240
  241 VTEAKRSLNY FRGFNKSDEI THPQVLEEFQ LLQKSLQQRN TAVKESFWRN LHEPEVYKPL 300
  301 VILMSLFAFQ QLTGIFVVIV FAVQISQEAG IEIDPFMCAV LIGLARLITT CPMGYILEWW 360
  361 GRRRAGIIST LGMSVCMFLL AGHSQIEILK EVPYLPVVAI VGFIVLSTLG LYTLPFFMIS 420
  421 ELFPQKVRGP ASGLTVAVGM FISFVVLKTY PGIKEYLGMS NCFIIFGVMA LFALIFVYLA 480
  481 LPETRRRTLL EIEEQFRSGR SKSQNQADVE MKEVFVRKPE E