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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-5-PA, FBpp03...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.70
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVINKAGNV IALLLVKLQL ILLFTLSVSG ELPQLDYGSL SASLEEDAID PLTAMAPFAN  60
   61 SLVTEESAQH KNNAELLGNS SEDENVRPQQ GSSSSGLGSS GAAGGSGILL EEFNSGKLSP 120
  121 GEASNTLPIF LIEPESVFVV KNRPAVLKCK ASHSLQVIFK CSGSSQPPPS THETHVDPHT 180
  181 GVNMEEVTAT IHRDLVDEFF GDGPFKCECH AWSSRGVVKS QAATVHIAYI RKSFNQSPTS 240
  241 LRLELGSRAE LRCEPPGGFP EPKLTWHKNN AVITADSEPG ITVSAGTLIF RQVALQHMAN 300
  301 YSCSAENIAG RRVSDSAVLI VYVNGGWSTW SPWRECKCAG KPSQGRKRSR TCNNPMPLNG 360
  361 GAQCPGPQIQ KSADCAACPE DTQIVSPDGF DISSSKRMAR WSAWSDWSIC SAECIQVRRR 420
  421 KCLTQGQTQI SSEAEEAGDL LLGAPGVGMA ALIAAAGVGA VGSPSEATGS SSDIIPGYGK 480
  481 SLCAGKDIQT AECRGEQCQI GKDDFDWTLY LGLAFITAVC FAFGTALICC ARRGIRTNPH 540
  541 YNMARSVMDA DYMPGVVEKK EMRMHIEASN MGYDYVNPGH RYLPGEHIMG MGIGCGGVTE 600
  601 HHYDVPNLSA NYTNPIDHLS VDYLSETGES STADTSNSTF DMNGKLSILN ASKSSTYEML 660
  661 GSAGGQLRLY GGELLLFVPE HAIGKHVKKH VSLLLLSDEC SRVSCATESS ILCSSVVHSA 720
  721 PRNYSFVKPV ILKIPHCLVA PEQWHVHIYH ADSEHDELSV NWRRAVSVGE ETINTPMFVQ 780
  781 LEATHVFIMT EQLGHFTVVA EPRIQQPSIK MKLLAFSQHT PPSNANCSLR IYVVKDFPNS 840
  841 RDICANVEAK LGGSFLGESQ VFAFTLNSRN LNIRVRSADV EAAAPYEHAI PYQHILSNNS 900
  901 ILHCEFSLRR QDQNSLCVDF GQGSEDDYYT FNIPAHSMSG SAEELASTTN TTISIDRQGN 960
  961 YVNESCVMDF VQLPHATKRL ICGALDPPRA DERDWRLLAK KLNTDRYIAY FATKASPTEQ1020
 1021 ILNLWECRAN SSPGSSSNSV SHTIMALLLT LKEMGRQDVL DIIVETIGPL WI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle