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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0311546, hbs-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFWITLTFA VHLATTICHV MAAVTAPTPA AQVAAPPVQK FHLTPHDLQI LEGTDTLLRC  60
   61 EVSNRAGKVQ WTKDGFALGF SAVIPGFPRY SVLVDAKQNA YNLQIKNATL EDDAEYQCQV 120
  121 GPAAGNPAIR ANAKLSIVAA PSSIVIEGYA RNARVEVEER QNLTLHCIAE NANPAAEIVW 180
  181 FQGEVPVSTA PIVTVNQTAP KRFTTSSTLH LQPRAEDDYK EFSCEARHKA LPPDVPMRAQ 240
  241 VQLSVLYPPG APFFEGYSQG ETLHRGQEVQ IACRSRGGNP PAQLTWYRNG VAISSPQRTS 300
  301 GRLSENVYKF TAAAEDNGAN LVCEAKNLLA TTPLRAELNL TVLYAPKDVY LSGANQAKVG 360
  361 DSVQLSCVTA PSNPQARISW SINGRPLDNS TYKTTSSSDG GWVSSSNISL TIDSQSRTFI 420
  421 AVCHALNTEL TQNVVGSHTV NVLYPPSPPL LTGYNDGDIL ISGSILKLQC SSAGGNPPPT 480
  481 LQWYKNDKII NAPSKLVDSK ITSELSLLVN ASDNNAIYKC KVQNAAIDIP LFATKTLGVH 540
  541 FPPETVKISV VPKNLVPGIR AKLICDSSSS NPPAKISWWK DGIPVEGLNL ANRPGLWGGS 600
  601 VSTLEMYVNI TQDLDGIVYT CQSHNEVLQR SVHETISLDI LYPPKFETPQ STTFVGVEGA 660
  661 PFHVELLASG NPMVITYTWT KDGLPISSNS LSGQRLISDG PRLNISRLSR NDAGVYICEA 720
  721 LNSQGTALLE IQVAVEYAPT ITAVSEGRSF VAGEPAVLAC HIQARPLEAA HVRWSRDGYD 780
  781 LATRTISSFE NGTALLQIAS VERSDIGNFT CIVDNQRGAP AAQNVLLVVQ TAPEIDHSPG 840
  841 FTRYAARLGV RAQLICRSLA SPQPSFIWRR HGKDLKMQRR NKFKSVERQV DALNFESALL 900
  901 IENTSPDDYG QYECVVRNSL GQASTTLEFS KPSRPDAPLQ LRVGNVSDTG VDLNWTPGFD 960
  961 GGMQTYFRLR LKQHGEDKYK YVDAKPGHQN ISLDGLKPGA TYYFSVMAAN EAGGSKFMPD1020
 1021 IKLTLSKGSQ PHSAEYTEKD ELPNVMIIGI TSAAMVLLVL NAALVAWFVI RRQNKSQSEA1080
 1081 EPSNDDVYSK DDSQSVYKLP ITALQADVQK KAAASTYLVE NVDIIQSTAY PPKYQESSMC1140
 1141 TPPYPLCNPD FTRTLPNPKR HSQRNSATGM IEGMQMRSKD DHMLISNGLY IPSPSPASSL1200
 1201 VIKGSYISSP SPAPPADGSY FNMSDKYMSY PPVTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle