YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7303156, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRNRRRSFP SSQYEDKTAA AQPSGSSLRS QSLSRLDISV QNSSIYYNDT RNTRPQMVSV  60
   61 AVGTVSTDIL NGRTSFLSLS QSHGSEVDLP SFYESFNPTF LPKLPIRRFP HMLVGASNEP 120
  121 EISKNQPAIP PSRPIEPISE VPFVEPAFEK KYSRTRGFSK ELSTHRDNEN EYIESTDEVS 180
  181 QMLSFTSYTD EYDRAEPLIT KTQKFYKKRS PLIPKYDSED SYVVPKETDQ QESGLSFNVT 240
  241 TVQLADTASP ESFSEYDGNR TRKQSFDMES KNSKESFDFS RGGRRLGSGM VFIYMVIPPD 300
  301 GGFGWVIMVL SFLAQLIIDG LIFTIGVLLP SIAQDLDVSI SSVSFVASVQ IGCYFTSGAF 360
  361 SAVLINRFGF RKVAIAGVLC SAVSILASSW SVSLTMLIFF YSVLGGITLS MIWASSQLIV 420
  421 GYYFERYRPM ANGFSCSGGG AGIVLFTFLN SWLVPIIGWR NMLRTQAGLI MLILLMVVAY 480
  481 VEVAPTQVGM YHLPGSSDTS SDEYYGNFYV HDYLRQSAMT AKSRSILSTY EPRPKKKGCA 540
  541 KFCPSCSNCC WRRRKKSQNA DEQNLLIRPA PLEREDLFYT GPAEYEKPHS KENVDGKEFL 600
  601 LMGSDKNTQQ VNYGIKNIRV DDEPDRISRV HRERRWSNEN QKKQNSCRNS RFMLTVLKLF 660
  661 DYRLLKQFEF KILVASAFLF PMGFNIPFVY SSARTTIPVE YARMIGPIIG ISNLVMRNIL 720
  721 GILAYKRRSW TLGLCGCGLI FGGVSVLISA FYGENLIWFQ FLYGFSYAVA PGAYIYLPYL 780
  781 SLQYYPLSFP WNSCLFHTER FDIREIPGTF KTDQRFWDYL IGHGNGRLYW DYNCW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle