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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Asx-PA
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTITPDTTT TTSSQHQQLL IPQADQHHQP MLQQQSLLAA PPPTMIMEHV NLVDDDEKDP  60
   61 LALEQLEVSP STKHTHSLRR HLPRIIVKPI PPEKKPMAPS EEAAVSTAPA PPTRLICSRR 120
  121 IQQQQQVKAA AAAAAAAAAA AAAAAAAAQA QATSSYPSAI SPGSKAGTSQ ASTMREVLAS 180
  181 IPGFSVKPRR RSNKKLTTAA QIEQTKDGKI DLETPDSILA STNLRALLNK QTFSLLPPLY 240
  241 QYNLIQLLPS VDREASELEQ PSSSASGGSP SEAIRLSASC LNNEFFARAC LEWRERLSEG 300
  301 EFTPENQLKL KTEAEREKNK LDPWKLKHFE PFWGEKNSRG KDKDKLESDC KNQKLSASIK 360
  361 SEPKPPATSQ QKPLQQATCD NETELKFDLS TKCETTSAKT TVAVAVADKS STFPPTGSQN 420
  421 NVLNEQQRRV LKRPSSSPSQ RKQAPTTIAT INLDDDLDEL PSTSKDSKQP KMDEIVPNAS 480
  481 GNVVAAPMVD VVDHSAVEMK IKDEQQHQRQ HQPLINSTCD KIEPSECSKE MIVAMKQVDS 540
  541 KEDVDSIASA AAMPAIAAVT PHTPKPEALA PNPDVANQFV SYLQNVELAA ETKAPLDNSN 600
  601 EADITTGTNS HDFVFSDTID HAYFQEHQST INHNFFTSSS SSNTATTAAN KLEEHSDKPE 660
  661 DSPLPIASSI SGSTPASSIT STSCTSSSSS SASMSSSCSS SNSGSTTTAP TTSSSAGAPT 720
  721 APLTLAAAAE TTLANVQAML STVAKLQQQQ QELPVELNSN EMYQHVQHDW NFGDIKLSSS 780
  781 QSSGDQQRNL SHEAIDLMDV VQDADVIDDI MHNDVCHDVL GDEDEGDQEE DEDDEVVECM 840
  841 TEEQQLIDED SEAVREIVDK LQQHQQQQNQ QQHHQQLHIQ DVVQLAQHSF MPQAHSEFGN 900
  901 DIGQEMLCDA VPMSAAEMEV SSTVITNSSN SNDSSNNISL CSSTNSLTIN QMPHQASQQP 960
  961 QQNAQSNAQQ QRQILVDSNG QIIGNFLLQQ QRQQQQQQLL QQFTLQAAAA QQQQQQQQQH1020
 1021 QQQQQQQQQA TSSNSLGKTL PVALRNGTQQ FLSPNLIAQQ HQQQQQQQLE QHQQQATAQQ1080
 1081 KHQQIQQFAL QQAQLHQRQL LAQAANNNLL QQQQQQQQNV ALPTTQAKFI AKPLNIISMT1140
 1141 RPANASPTTA ATTANTASIP SAYANVVAVT GAQQQQSPPV PAPQQQTVQQ QQLANHNSNM1200
 1201 QQLPNVLTMK TLPPSGVPTT IAQQRLQPKM PTGKGRKATS NRLPPGAVNL ERSYQICQAV1260
 1261 IQNSPNRENL KAQLRPPAAI LNQHQPTTTT APAPINPVTL NVSTVAATPM SNITTATGSM1320
 1321 AAAVAAAPPQ NVLKQEELLV SGAVGAGALP AGLPPNVMGV GRPGVYKVIG PRMSGFPRKK1380
 1381 YVQRKPSPTT LIRHVFSPGP GGATATAQQL QMLQQHHQST TSPVPVQNPQ QPAPEQLIHQ1440
 1441 NGNGQYVLVH RANVGAADNQ APRASSAPPM HQNQFVTVQN PLHSINGIPM GGRGRPASVD1500
 1501 TTAGSGNVIA PPISATDALH HHHHEMQQQQ QHQQPQPLGN VGAAANIVRR NIAAGPNIAY1560
 1561 IDGSNTNSSA VALMEAGNNY IVTTNASPTA APSPINQQPQ SQPTGTQHQH PLLQLHQTGE1620
 1621 NTPPGNEATA TANNCACSLN AMVICQQCGA FCHDDCIGAA KLCVACVIR

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