YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: stj-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWSRLLAWW RLCLGLLSVL VCLAPCVNLQ PAENINYNLV HSWADKLGME LFHLGDFITR  60
   61 RKEVQESFKD AKVVSRNGAS IVDSMAKEIE MMMDLKVSAV RRIMDTAENT ALSHQNDMAD 120
  121 KMFSYYSAKE MLEPGDPVPP IPTPAPDMDK DIGEPLIYVQ PKVVVLEPRP EFHNTPVNFS 180
  181 VSSVHVPVNV FDRAPDVIKA IQWSENLDQI FRDNYKNDPT LSWQFFGSST GFMRQFPASK 240
  241 WRKDVPVDLY DCRLRSWYME AATSPKDIVI LMDGSGSMLG QRLDIAKHVV NTILDTLGTN 300
  301 DFVNIFTFDK EVSPVVPCFE DTLIQANLGN IRELKEGIEL FRPKSIANYT AALTKAFELL 360
  361 EETKLSSRGA QCNQAIMIIG DGAPENNREV FELHNWRDPP YKPVRVFTYL IGKEVANWDD 420
  421 IRWMACENQG YYVHLSDTAE VREMVLNYIP VMARPLVLGR HDHPVIWSQV YADIEDTKLS 480
  481 DYLWDINQCE YQKADVLEYW QVHDRMLEPS EMHRRKYRRM KETWNQPVDS NVYQFMTTVS 540
  541 MPIYDRRENA TRIANILGVA GTDVPINEIK KLLSPFTLGV NGYAFIVTNN GYVLFHPDFR 600
  601 PIFQGYILKP AYNSVDMIEV ELLDDDRPAR DFNPVLMTIR DSIINQSTGS KWMLVKNHFD 660
  661 EMKRVARVKR QYYWTAIKKT PFTLVISYPE QYGVSHMDIR ADQEIHRISI KGTNLRSVFS 720
  721 GKRWKIHPDW LFCKHSNRTF KTPEIELLYF LERMSEPGWR WPGSRSAMPP EHAAAMFCDR 780
  781 QLMQALVFDA RVTGWFSNNT SFNSKDDKGN EFKQRFGVTV AFLATHSGLT RWHEFHSNAA 840
  841 EESGVGETFS QNNTRAIDEI WYKRAVDQHF VREESFVYSV PFDAGESNSE ILVTASHAVF 900
  901 HNEGGKTAPA AVVGFQFQHS ALYKLFHNIT GNACAVDDKD CYILDNNGYV IISTRVHETG 960
  961 RFFGEVNGAI MKRLLEENVY RQVTVYDYQA VCFESKNDNN ASSMLLSPLF HLLRVGKWLL1020
 1021 HTALWYIVQL LQWAPGVSSH YADMYGDSND TEPPPPEPHP DHHARNGNGH GKKDDDHWLR1080
 1081 YLTLHRTRLK PCDMKRDLYT LFNEKDNVVY NMTAHACERP FVVLPIPFSN LILLVIDQLC1140
 1141 PRDGSVVLTV NPQPIDYHLS VNDSLACYKQ AREFNRMRPH SCISRHANES GIKLCGKACS1200
 1201 VYANLGLLLL CHILSRWL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle