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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG18445-PA, FBpp...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEPPKFIEN DCYNGSRTFT WLADMVGLSV DLVNFLICQI SALFLASLFR SMLHPSKVSS  60
   61 KLRHTFALSI GLAFGYFCFG QQAIHIAGLP AICYIVIRTQ DPRIVQRAVL LVAMSYLLCV 120
  121 HLMRQLYDYG SYALDITGPL MIITQKVTSL AFSIHDGFVR GDEELTKAQQ YHAIRKMPSA 180
  181 LEYFSYVWHF QSILAGPLVF YKDYIEFVEG YNLLSTPPGN GNLDSSKREV VLEPSPTKAV 240
  241 IRKVVGSLVC AFIFMKFVKI YPVKDMKEDD FMNNTSMVYK YWYAMMATTC IRFKYYHAWL 300
  301 LADAICNNSG LGFTGYDKDG NSKWDLISNI NVLSFEFSTN MRDAINNWNC GTNRWLRTLV 360
  361 YERVPQQYGT LLTFALSAVW HGFYPGYYLT FATGAVVVTA ARTGRRLFRH RFQSTQVTRM 420
  421 FYDILTCLIT RVVLGYATFP FVLLEFMGSI KLYLRFYLCL HIISLVTIFI LPKFIRGERR 480
  481 LRTSNGNGNV RLSGSGNTKD AVTTSVESTA ALTAGNDLNE DKEEDKHAQC KVHTPTQQQP 540
  541 AAGPHKTTVE QPTEQPNNVN LRSRPQQQQP HLEKKAMPPT CARDAVSVPH DQCEMDQLSS 600
  601 KLKEKIEAET KNIEEFIDKT VTETVSGIVE FKNDLMRDIE FPKLKLPGSN GAISLDSSNG 660
  661 GGLRKRNISS VHDNGTDPGH ATADLHPPLE ENGAAFLKKE IEVINAVVQQ AVPAVLSNGH 720
  721 AK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle