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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG13739-PA
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERGTSGGQQ QQHQQQQQSS HHHHQQQQSS HHQQQHAHHQ QQRHHQHVVA VHSFDPYLTV  60
   61 GGADEEHTSG TSSFDNPATK KKPPKLKPIH RSLSMAIDNY APSSGDLDMD LDMEMGMDMD 120
  121 LDMEMDLEGE GIIISEKPLI HRSASPLPHP RSGALPPQTL AIPAQQQQQH IISHPSQRGG 180
  181 GGGTGSGAVS PALSARQQHH HLLQQQQQHH HQQQQQHQQQ QQQQQHQLHL HTFQQLAAQA 240
  241 AAARHQTTHQ QHSLSHRQHT QQHTHPHQQL QHPHPHQHAH SKSSPTSHAV SPVLGQQHRQ 300
  301 QPDIYLVSSS SSLGDGVGVG SLGVGMGMGM GRSLGGSTSP IQFIDVDDMP NPTVAPHQRP 360
  361 MHPLKKNLFR RSDTIDVHPS TNFQMKKTHS FHAQQDPAAL DQIQLAVAAG SATSSRRTSS 420
  421 VRGNFLMPGP PAGAKEISRS PSPSRRGCRS HRSFNDPGRR PSVKPDSVVE SQIRHPSLND 480
  481 DLMEPMNGRN LFAAPTNLSL ENELFVDTRS RSNSHTKMEE LGLAEITAAA VAVQRLRKSS 540
  541 GAGSFEDAAA GHSATHPPSA ANSIKQKRDS HHPHTRQVST HSLELDGRPS TSAAAAAAAA 600
  601 GGHGLQLHSA AAAASAAYHF KRGAQHGRSL YLSPSNLEEL AVHRPGVLAA AAAFQGTNAS 660
  661 ASVKQAKALH SASVRLRSYR ETLSASKKSK SFIGDASAGS GPQAGDDFEL SSPHRRNSRP 720
  721 LSTVVPGSSI EEIKRSPRPI SASAAAAAFL EEKRPSFERK SSLTYDHELS DAAFAAQVLR 780
  781 PFHHKLAAGR KGSVTGGSHK LKKKSLSDDT DEDEAADRKR KRIVCIVLST VLLCLVCASV 840
  841 FVLTITLTSS SGQGGKKAHS FSRDTPVHWT GMRPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle