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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG8027-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLRRRWPRR MRRAMEQLRL QSRRKLLALT MTGGLCLAIW VVANYLSASE EGQTGGFSSA  60
   61 CTAIDAVYTW VNGSDPNFIE DIRRFDDKYD PSRFDDKNEL RYSLRSLEKH AAWIRHVYIV 120
  121 TNGQIPSWLD LSYERVTVVP HEVLAPDPDQ LPTFSSSAIE TFLHRIPKLS KRFLYLNDDI 180
  181 FLGAPLYPED LYTEAEGVRV YQAWMVPGCA LDCPWTYIGD GACDRHCNID ACQFDGGDCS 240
  241 ETGPASDAHV IPPSKEVLEV QPAAVPQSRV HRFPQMGLQK LFRRSSANFK DVMRHRNVST 300
  301 LKELRRIVER FNKAKLMSLN PELETSSSEP QTTQRHGLRK EDFKSSTDIY SHSLIATNML 360
  361 LNRAYGFKAR HVLAHVGFLI DKDIVEAMQR RFHQQILDTA HQRFRAPTDL QYAFAYYSFL 420
  421 MSETKVMSVE EIFDEFDTDG SATWSDREVR TFLTRIYQPP LDWSAMRYFE EVVQNCTRNL 480
  481 GMHLKVDTVE HSTLVYERYE DSNLPTITRD LVVRCPLLAE ALAANFAVRP KYNFHVSPKR 540
  541 TSHSNFMMLT SNLTEVVESL DRLRRNPRKF NCINDNLDAN RGEDNEMVRH LLEDFYLSFF 600
  601 PRRSKFELPP QYRNRFESWR DFQRWKRRKR AVLVIGYGVS LLLVVCLLRF MCHHKAKLVR 660
  661 RCVQRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle