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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28573311, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLPLSVAQ TAALWAKIFS RLAIKKMMEL HANDVDLEDG ELSESDDDGV YTPLQRPDGA  60
   61 EKVASPLTTC HQIQTALEDE SQSNSDSSTA ESSEDGCIKK LRTESTGPDG HKKRKKRIRR 120
  121 TVMRRVPPTD AEMQPNRARF KKYNVWASAL QEDALSENMR GCDVTRSGRD RNVENYDFSL 180
  181 RYRLNGENTL KRRLSNSSED GGECSHPAHK RGRPSSRPIT GNQQRGLVKS RTGHRSRRGT 240
  241 SSASGSSDFC EPRHILDLNE VGERDPSDVA TEMASKLYEE KDELLVRVVE VLGIDVCLEL 300
  301 YKETQRIEAD GGMMIKNGIR RRTPGGVFLF LIKHHDNITQ EQQKRIFSED RQSLSKSRKQ 360
  361 IETLMRDRKV EELKKCLSKQ VTELPTLNQR KEYYMQGDEQ SEDKQPGSLS NPPPSPVGAE 420
  421 QEHDSPEYRT HEININLVDN AELPSTSKAA AAAQGAPLKD LISYDHDFLD VNCGDMDFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle