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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Vang-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENESVKSEH SGRSRRSRNH NNNGGGGGGG GGGGGGSVNN GYHRERDRSR HSHRSTHSSK  60
   61 SAKGFQRGDM APYQTSVNMT GDGSHDGQEV IEVQILPQDE NWGENTTAVT GNTSEQSISM 120
  121 EDINNMWHRE SDKGFSFACR RYVESSFYFL LGCGAFFSPV AMVVMPYVGF FPSAFDHPEI 180
  181 TQTVRTQLLA CSEQCKGQLV SLAARLLLLA IGLWAVFMRR TSATMPRIFL YRALVLLLVT 240
  241 ICTFAYWLFY IVQVTNGAKI VVETGGDAVD YKSLVGYATN FVDTLLFIHY VAVVLLELRH 300
  301 QQPCYYIKII RSPDGVSRSY MLGQLSIQRA AVWVLQHYYV DFPIFNPYLE RIPISVSKSQ 360
  361 RNKISNSFKY YEVDGVSNSQ QQSQSRAVLA ANARRRDSSH NERFYEEHEY ERRVKKRRAR 420
  421 LITAAEEAFT HIKRIHNEPA PALPLDPQEA ASAVFPSMAR ALQKYLRVTR QQPRHTFESI 480
  481 LKHLAHCLKH DLSPRAFLEP YLTESPVMQS EKERRWVQSW SLICDEIVSR PIGNECTFQL 540
  541 IQNDVSLMVT VHKLPHFNLA EEVVDPKSNK FVLKLNSETS V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle