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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pnut-PA, pnut-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSPRSNAVN GGSGGAISAL PSTLAQLALR DKQQAASASA SSATNGSSGS ESLVGVGGRP  60
   61 PNQPPSVPVA ASGKLDTSGG GASNGDSNKL THDLQEKEHQ QAQKPQKPPL PVRQKPMEIA 120
  121 GYVGFANLPN QVYRKAVKRG FEFTLMVVGA SGLGKSTLIN SMFLSDIYNA EQYPGPSLRK 180
  181 KKTVAVEATK VMLKENGVNL TLTVVDTPGF GDAVDNSNCW VPILEYVDSK YEEYLTAESR 240
  241 VYRKTISDSR VHCCLYFIAP SGHGLLPLDI ACMQSLSDKV NLVPVIAKAD TMTPDEVHLF 300
  301 KKQILNEIAQ HKIKIYDFPA TLEDAAEEAK TTQNLRSRVP FAVVGANTII EQDGKKVRGR 360
  361 RYPWGLVEVE NLTHCDFIAL RNMVIRTHLQ DLKDVTNNVH YENYRCRKLS ELGLVDGKAR 420
  421 LSNKNPLTQM EEEKREHEQK MKKMEAEMEQ VFDMKVKEKM QKLRDSELEL ARRHEERKKA 480
  481 LELQIRELEE KRREFEREKK EWEDVNHVTL EELKRRSLGA NSSTDNVDGK KEKKKKGLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle