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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cathD-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKVALLLVA FLAAAVAHPN SQEKPGLLRV PLHKFQSARR HFADVGTELQ QLRIRYGGGD  60
   61 VPEPLSNYMD AQYYGPIAIG SPPQNFRVVF DTGSSNLWVP SKKCHLTNIA CLMHNKYDAS 120
  121 KSKTYTKNGT EFAIQYGSGS LSGYLSTDTV SIAGLDIKDQ TFAEALSEPG LVFVAAKFDG 180
  181 ILGLGYNSIS VDKVKPPFYA MYEQGLISAP VFSFYLNRDP ASPEGGEIIF GGSDPNHYTG 240
  241 EFTYLPVTRK AYWQIKMDAA SIGDLQLCKG GCQVIADTGT SLIAAPLEEA TSINQKIGGT 300
  301 PIIGGQYVVS CDLIPQLPVI KFVLGGKTFE LEGKDYILRV AQMGKTICLS GFMGLDIPPP 360
  361 NGPLWILGDV FIGKYYTEFD MGNDRVGFAD AK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle