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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pwn-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEWLLVGIE REPGQHESVS QISPKSSSHR SPDRQRIEST MADSVNGLAE GQSSPLDVND  60
   61 NETRAERVER SASPILHDRQ PIGPNDVHFP EDLEKDVSAG RYFHYNIKPT GTFDNQDEQP 120
  121 ERTHQGIRAG KTLSQGGSSS EQSFLGRGDL RPLVSGSPIR PSPSNTATSA TAASATQAPH 180
  181 SPRQNGNPDI QDIITGIVKL LNGNVNVHAN TQGIRRPSAS RINNRGPPRI SEAQNLPIDY 240
  241 EAQKPGTSMR PPPYPFDRPE RPFITGVPIP EQIVPVRPGF VSNRPPWYRN KPRPPIATSV 300
  301 GGNRRPLPQY KPLPAPPVQA PLQPQDPLDR KNEQEKEQNH QEQPQPTDDV VLPTDTTYDS 360
  361 EFSNEDANAQ YIEVSDQDTD ATGGEVEDEL QPPPPPPSTT NNPPTTPTNP SKKKHKPKPG 420
  421 SEKKKLPEES PQDEGFSTII ETSSVVHTVM GMSSTYVPMS MDSSESLGLD PSTEEVIFMT 480
  481 ANRTPTLEPS VTSSLGTSSS SNPASAIQPT SSKEHTKTTT TTTTTTSSST STTTSTTTPP 540
  541 STESVSPNSS NANTNATPPA PYHPRPGIVL DDPEFKPGGR PRPPVQRPPA QQTLPLPAVQ 600
  601 PTRQHLPPGY GEIFDVTLSA IQGPGPKGSG SQQTINIKPY GSYAAGGGQG DIIVSASGDD 660
  661 GFVSIDGKRT YINLFGDPTD PPAGATTPAT RLPQLPGSGS GSGSGSGTGS GGASTPGVGV 720
  721 SSGGGGGSGS SISPAAPANA VTQSSGGYVV PETEVVDLQG HSKPQGGAPT TNAGPTRPHY 780
  781 RQRPTQPPVR IDTCIVGDDS TCDQAQHERC KTDNGVSSCH CRPGYSRRKH REPCRRVISF 840
  841 HLGMRVDRIY EHRIVWDTKL MDKHSEPFGQ LSYESIRALD SAMSMTPYSD EFMEAKVNNI 900
  901 YRGDPNLGGS GVYVNMTIKL DESVETLRPN LRSDVQKHLL GVLHRRNNNI GNSVLYVSSP 960
  961 EGAVSALQDL DECQSPELND CHSGASCSNT WGSFRCACEA GLRDPWADQP ARSGRECQAC1020
 1021 ADSVCNNHGT CSYAEDGAQL CTCDSSHYGA QCEIDGEVLG VAIGASVAAI IIIVLTLVCL1080
 1081 IMWSRRWQRE QKNAMGSPVF GYMNTAPLKS AGLPQAGYQV TLEDRMRWAQ IADVMAQTNH1140
 1141 YGAEPIGPTR PSSAMFAYPN LGAMGMGTLG GMSLQSTMQM HPSATLAPPV PLPRRLGLGP1200
 1201 RSNGMRTLEN SSSSEEEDRA DLLGRNFQVP RPKSRSNGSI ANQSGIYYDV DYEPSGNGIG1260
 1261 NSSVDHLYGS QNQSVTHSSG HSHIPGPQGI PMSTYTSGRA PSSYYMK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle