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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nec-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKVSILLL LTVHLLAAQT FAQELIAWQR QQQQQQQQQL QLQQQLLLQQ QQHQRNPRPE  60
   61 LGLRSLPGNP WTQNNQEAIS DVVAVDLTKR EPVTPPPNRP PPVFSYMDRF SSELFKEIIK 120
  121 SQSQQNVVFS PFSVHALLAL IYGASDGKTF RELQKAGEFS KNAMAVAQDF ESVIKYKKHL 180
  181 EGADLTLATK VYYNRELGGV NHSYDEYAKF YFSAGTEAVD MQNAKDTAAK INAWVMDTTR 240
  241 NKIRDLVTPT DVDPQTQALL VNAVYFQGRW EHEFATMDTS PYDFQHTNGR ISKVAMMFND 300
  301 DVYGLAELPE LGATALELAY KDSATSMLIL LPNETTGLGK MLQQLSRPEF DLNRVAHRLR 360
  361 RQSVAVRLPK FQFEFEQDMT EPLKNLGVHQ MFTPNSQVTK LMDQPVRVSK ILQKAYINVG 420
  421 EAGTEASAAS YAKFVPLSLP PKPTEFVANR PFVFAVRTPA SVLFIGHVEY PTPMSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle