YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17861682, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSTPHPRS IWILTGCWLL PLLGLALFPF PPVHTADVTM ADAAHQEFAR RLALFSINVY  60
   61 GKLSGQKPGE NIVFSPFSIQ TCAAMARLGA ENETATQLDQ GLGLASSDPE QIAHSFHQVL 120
  121 AAYQDSQILR IANKIFVMDG YQLRQEFDQL LSKQFLSAAQ SVDFSKNVQA AATINNWVEQ 180
  181 RTNHLIKDLV PADVLNSESR LVLVNAIHFK GTWQHQFAKH LTRPDTFHLD GERTVQVPMM 240
  241 SLKERFRYAD LPALDAMALE LPYKDSDLSM LIVLPNTKTG LPALEEKLRL TTLSQITQSL 300
  301 YETKVALKLP RFKAEFQVEL SEVFQKLGMS RMFSDQAEFG KMLQSPEPLK VSAIIHKAFI 360
  361 EVNEEGTEAA AATGMVMCYA SMLTFEPQPV QFHVQHPFNY YIINKDSTIL FAGRINKF

Type	Start	End	Confidence
Signal Peptide	1	35	0.99
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	418	0.99