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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ac3-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANLENGQK TIASTSKSHS QRQTTSRRRQ NDSDVAGGVG ITGGGVVILP QHVLNELYHN  60
   61 YSIKQRRSGL KWFVFAAALF NIWTIGIPWD QSAPTRVINC CMLLAYLALT ALLHIGRRSD 120
  121 KPALRRFHQI LLIIVPRALW LLSILHFTVY VILQPSFSPR DLLGWAILLN FLVYVTLPLQ 180
  181 LIFLGLSIGC ITYFICLSLP VGYSHWDSLL SNQLAANAVL IATAALIGLL YYFMGEAKQK 240
  241 RAFLEAKKSL EVKMVIEEQS AEQERLLLSV LPKHVAIKMR EDLGSSSSEA FKKIYMSRHE 300
  301 NVSILYADIV GFTAISSTYS AQDLVKMLNE LFARFDRLAE KYQQLRIKIL GDCYYCISGA 360
  361 PDERPDHAVL CVHMGLSMVK AIKYVQQKAN SPVDMRVGIH TGAVLAGILG QRQWQFDVYS 420
  421 KDVELANKME SSGKAGRVHI SDKTLAFLNG EFEVEAAFGE KREELLRIAG LKTYFITKVV 480
  481 KAFASPCAKK INETQAEIAH PNPNGSTTDI VSDEDDNDAT LDDEELLAQN SVSNGHQIGI 540
  541 AVTADEEEQV KLENFKQRLK DELVTRDGHE NLTKDTNIFL RFKNPQLEQL YAVYREPYSS 600
  601 LPLLAALLVQ CIDVLYSYLV LPRSTLHFIN IAAPLVPIAM LVVISLAESF SGMLPKFFVD 660
  661 VSKRFNDITF VRELAAIIIA LTIGFSNVID MFFFVTFVRT EHIVSESEFN VTASLESDIN 720
  721 LVVEGMVTAE HLLPASFVEQ MRDAVPTERV LYPSYLSNFG VLILIAIAVI AQLTHLTKIL 780
  781 LLLSIAALHC YFNIFIMQDL YALEDDFEHQ PIISTRYAAS GLLLVAALAL STLARHMDHE 840
  841 DRVIFKWKTE VAEQKETAND MRQRNEALVY NVLPVHVAEH FMKNTKRSHD DLYSQSYAEV 900
  901 GVLFASMPNF SDFYSEETVN NQGLECLRFL NEVISDFDAL LELPQFQDII KIKTIGSTYM 960
  961 AASGINVQRT VRNDAPITER WSHLAILVEF ALELKHALQS INEQSFNHFV LKMGINHGPI1020
 1021 TAGVIGARKP HYDIWGNTVN VASRMESTGK AGAIQVTEET CNILRLFGYT FLQRGLVAVK1080
 1081 GKGQLMTFYL QGKSQSSAEP VASGVVVLNG QDSSAVESTS ELEASDIKMP LLKMNGPEQS1140
 1141 LEIDQDRSLR NDSAGQESVA ECQSLLE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle