YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0307148, CG9...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	296	0.99
Transmembrane Helix	297	319	0.91
Cytoplasmic	320	360	0.95
Transmembrane Helix	361	384	0.91
Non-Cytoplasmic	385	392	0.78
Transmembrane Helix	393	415	0.90
Cytoplasmic	416	429	0.88
Transmembrane Helix	430	452	0.91
Non-Cytoplasmic	453	465	0.84
Transmembrane Helix	466	489	0.90
Cytoplasmic	490	516	0.94
Transmembrane Helix	517	538	0.89
Non-Cytoplasmic	539	550	0.72
Transmembrane Helix	551	575	0.88
Cytoplasmic	576	584	0.83
Transmembrane Helix	585	609	0.85
Non-Cytoplasmic	610	624	0.90
Transmembrane Helix	625	649	0.90
Cytoplasmic	650	659	0.97

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLSGLLPL LGVVLLHLAT PTQAFYLPGL APVNFCKKTD VSSTCKSEIL LYVNRLNTEE  60
   61 SVIPYEYHHF DFCLGEEQNS PVENLGQVVF GERIRPGPYK IQFLENQQCA TTCVKTYKGD 120
  121 DPASNRRMMV LKKGISLNYQ HHWIVDNMPV TWCYPLENGK QYCGIGFPMG CLVRSDGEGC 180
  181 PINSIYNQPM HYYPFNHVDL EITYHSGQSE DWGIQFGNSG RIISVKVTPK SIKHTDKENP 240
  241 NCLSTEPLAI SENSLKAGEQ LEIVYTYSVK FVKNDSIKWS SRWDYILESM PHTNIQWFSI 300
  301 LNSLVIVLFL SGMVAMIMLR TLHKDIARYN QMDSGEDAQE EFGWKLVHGD VFRPPRKGML 360
  361 LSVFLGSGVQ VLVMAMITLA FACLGFLSPA NRGALMTCSM VLFVSLGTPA GYVSARIYKS 420
  421 FGGLKWKSNV ILTSIVCPGV VFSLFFVMNL VLWGENSSGA VPFSTLIALL ALWFGVSVPL 480
  481 TFVGAYFGFR KRALEHPVRT NQIPRQIPDQ SIYTQPIPGI VMGGVLPFGC IFIQLFFILS 540
  541 SLWSSQIYYM FGFLFLVFVI LVITCSETTI LLCYFHLCAE DYHWWWRSFL TSGFTAVYLF 600
  601 IYCCHYFVTK LSIKDSASTF LYFGYTAIMV FLFFLLTGTI GFFACFWFIR KIYSVVKVD