YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220944624, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQFFNRIG QMGLGVAVLG GVVNSALYNV EGGHRAVIFD RFTGIKENVV GEGTHFFIPW  60
   61 VQRPIIFDIR SQPRNVPVIT GSKDLQNVNI TLRILYRPIP DQLPKIYTIL GQDYDERVLP 120
  121 SIAPEVLKAV VAQFDAGELI TQREMVSQRV SQELTVRAKQ FGFILDDISL THLTFGREFT 180
  181 LAVEMKQVAQ QEAEKARFVV EKAEQQKLAS IISAEGDAEA AGLLAKSFGE AGDGLVELRR 240
  241 IEAAEDIAYQ LSRSRGVAYL PSGQSTLLNL PSTIAQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.77
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	276	0.96