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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22946753, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTVSLFGDG YVSMPLQEAK MSTNIRVKFR TRQENAFLFL AAGRTDYCLL RLESGLISFS  60
   61 YKIERDVVQL RSPKKQKLND LEWHDVAVQR FENNITLQVD GYIMRKQLPG DLAALNIHFG 120
  121 TFLGGVGDFT AEFLDDVIGF RGCISDVFYN NINIIKRAKD RTSHTTSTGV AWTCSTEFEG 180
  181 SIQDSISFMR NDSYSLMMKE SYAMGETLSL QFRTMASAGV IFFNGGYDFI LLEIEDQHLK 240
  241 VTFNKAGSLV QFMTNEHISD GKWHRVFLRY NAAIAELSLD DATSGYRGTH ANETKASINL 300
  301 EKSVFFGGVQ EEMRRRLISK GLRINEISFK GCMRDILVND LPLGFAEMTI SRSLALNCLW 360
  361 KYPCVEYNPC LKSGICSQHG VDGFICYCDQ SYCIKADFQG PFKIFTETSP ELELLYVSPM 420
  421 QLLEGGTAFL SPHFIDIILD LRRYPSLNEQ SIIFHVVHQP KYGQLLQYSA EKAIFVPCRT 480
  481 FNLVDLATDK LKYVHNGQEN FNDHATLDMQ IFGDVHKIPE NILGKHRFLL HANITPINDP 540
  541 PQLRLHSHKI LRVIEGIERV LDVDLFNIDD PDSEPGNLIY TILPTQSPQE TFGCFIVGGA 600
  601 TTSAFSQAEV NVGKVSYLYN STTAESFSYE LQLQVSDGIE TSETVYLPVS VHPLELRLVN 660
  661 NTGLIMIHKS SLPISTANLS IGTNAVDDHI DIRYDIVKAP QHGVLQRLRQ IDGSWVNVDW 720
  721 FSDSQLLLGH IRYLHSSDFP WQDEFKFIAS FGFVTTQTFD FRITFTRLRI TSTRPSQISI 780
  781 NGSREILLTS DVLSYETTPI GSFARSVIYK ITKPTRYGGI YVEGSRKAAK KLDSFTQQDI 840
  841 EKRRIRYQTH HTSYSSFSDH LEFVVSVAEC DDVAGVLEIN YRPPDELINK LGYQNHEPLQ 900
  901 VQEGERALIT KNHFGIRFNI YESLQFQVSL SPEHGVICKY DEQTGLTTPV EMFTLEQLFR 960
  961 NDIYYCHDDT ESTRDTFELL ILSGDETDLQ FVSNMEVHIK LVNDNEPYRT AIERVFHVVR1020
 1021 NGIRTLNPTV LQYLDADVNT NHTDIHYIHV SSTNGAFYKS GHYIDSFTQD DIANRRIMFQ1080
 1081 HTGADSGTAS FIVTDREHEV NGLLEIRASD PFVSMMATNA SIVQEGKFVV LKNKDFILET1140
 1141 NLDMKLDEIY YEVIKPPSYG ILMYLSRANE GENGTTIYKA TNYTSLSNFT HLDIERERLV1200
 1201 YWNTEIASMD KVRYRVHIKN ITAEGEVMFR IYPSAYWEPL QVKQNHTLYV EESTSVLISR1260
 1261 DVLEVVHPNI SPGDITFLVT SSPMHGYLEM QSMSFDDEYN CKVFDQSSVN TEKMFYIQAG1320
 1321 VNQSTDYFVF DVTNGITWLR QLMIKIVIIP EKLYMHSNII SVVEGKTVQL NPTDIQPYSE1380
 1381 YYRGKILEYI VTITPSSGHV LAGNSKVKRF TQKQLEQGSI QYVHNGSENA TDSITLVAMA1440
 1441 RNKESVPFEL EFAVVQVNDE EPMMVTNTGL QVWNGGRYVI KNTDLLAQDY DTPPENLTFV1500
 1501 VNHIYGGYLA RKSAPHQKIE HFTQAQINLE EIYFMHDSNS RRNELSFVVT DGLFNTTTQM1560
 1561 LNIEIKPIEI LAEHNENLHV FPLTKKQILR DYLHFKCSDE EREIRYNITV PPSLGRIVNE1620
 1621 FIDNGFTKEV SEFTQNDVDN GHIFYEHTAV IMEFRTNDSF YFDVVAERSD RLLNQKFNIE1680
 1681 ISVSSGGLLR FLPVNKLNVD EGGSVPIKLD FSKILEYLKT KAGINNPELF IEAIQKPTHG1740
 1741 NIGLGHEFKH MQRYHPSDFF TKKVYYIHDH SDTLEDTILM SVYLTQGNIF LCNLTIPVSI1800
 1801 NPINDQPFHL VTHLPQMTVV EGENRTITRN DLLTEDADTP PEEIIYDVMS GPTLGVLRKI1860
 1861 TNDGRPEDLL AFSNQFTQAD INNDRIIYVH FGMPQSTTFC FTVSDGQSNP AYEIFTIKID1920
 1921 SIHLQPSAMQ APVKVQQGAT TAPMRLDHIG VSTNVHMERL SYNVTNSPLF GIIVYKHQPT1980
 1981 LRFTQQQLET SQISYMQTDL NRSNDSFQVS AYVPGTNYVA QVDVVMEVEP VIQINDIVMK2040
 2041 EAESSGGKIK LITSLDNDNP LSLKLNKFNP KFVITRMPST GQIRKIIRST GLTTDGQSDR2100
 2101 STNIFSYKEL RSGVVYFVPH ESVEETEADH DSFDYQLLIK TVQPAQATVS IEYRSRVEET2160
 2161 ETVHLGSAGL SINYLAIGCA IFIVLICLLI VLLILKIRKL RKHKADISKD QPPALPCPPD2220
 2221 LTSVSPQHHL HHHHGHHYAS SEADSVPATG NSTPLPGFSN IPHCKIIPVE SYKHEYPDYD2280
 2281 PDEEETDDQC DPQQMMLPQR YNPYHMEHDA WSSSCDMAND FAGYASVPQS ISGSVSSPPS2340
 2341 APPTNPLLRR NQYWV

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