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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG12455-PB
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETAPPAAV GKWATQFGDE LFALAQKITK SQEIKEKYKE YNARVELKNG TELIKSITKN  60
   61 VGRMLARKMD AVRCIQERAE YVNENFEFNL TYALQNFTYF SSKYSTFNGN SSEELEPNEA 120
  121 EFAWMYRNME LNPDTHFYNT PVDTEHSSVH VPSNIWDRSE RVLKTIMWSE HLDEVFRQNY 180
  181 QSDPALSWQY FGSDTGILRH YPAAQWTDTR PNRDDADTYD CRKRSWYIET ATCSKDIVIL 240
  241 LDHSGSMTGF RHHVAKFTIR SILDTFSNND FFTILRYSSE VNDIIPCFNG ALVQATPENI 300
  301 EVFNQQIEQL DDPEGYANLT LAYETAFQLL RKYYDSRHCV TNSTCNQAIM LVTDGVAGNT 360
  361 TEVFQKYNWG NGENGTSQMD TRVFTYLLGK EVTKVREIQW MACLNRGYYS HVQTLDEVHE 420
  421 EVLKYVDVIA TPLVLQNEQH PPTWTHAFTD KTYDPKTSNE KRPRLMISVG VPAFDRFYRH 480
  481 ANSTNPRARL LGVAGTDVPV EDIDKLTLPY KLGVNGYSFV VSNNGYVLLH PDLRPIGTNG 540
  541 KMNPNYNSID FTEVEHLFED QSPREPGESI LHIRNAMVRH EANEFKSISV KFHYDKMRRV 600
  601 SEEKQDYFFA PLPNTPFTLG IVMPSEYGKT WIKVGEEVDK NKHMKINISD FFIGENWKVH 660
  661 PDWVYCKYHY LEGHEFKTPE AELREFLAKM QNDWKWSEQY AEDESDWDDK DDLNCGRKTL 720
  721 GDDAYYCNKE LVNLLIFDAK VTNSSYGVWR FESDEERQLI ERFRADLRFV ATMSGLTRWQ 780
  781 FIFGEVEVDT DREFGDYHTT AIDETWYKSA ILQHHEDRAE SFVYSVKYYD DPMEDSEVKV 840
  841 TASHAIFPRD GGKEAPACVV GFQFSHARMW ERFFNITAVD HCNHCLPICT DDDVDCVVID 900
  901 NNAYIVIGQN INTTGKFFGE FHGDVMTAMV ERGIFLSIEV YDYQEQCKEE PKAGSDGHGL 960
  961 LHPLRLLSLG WKYLVGRLFF EYQRIQWWAD GAPFMEYTDE IEDEYVAVGD GGKSSASKPK1020
 1021 DDSDDENAMF DEPEPDPIYK ACDKRSTLYA LQPSALVGIN DFVEAPSTRP FLVKKIPNSN1080
 1081 LVLVVVNVLM PSRSVRLTTE PQRMEYDKEF PCYKLNMSFY ERRRIEECYT VHEDEELYTY1140
 1141 CGNASRLVLT LQLMPLTIIL VFYLTHSFMR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle