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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACXB-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKKTAYAPR KCYLDYTDER LWERGYLKAK CKELCLEEEY KKYQIRLMIS YLTVFFPLFI  60
   61 FVVVGCELCP WIFSEQKKLI YYESLTAIVV LVAVPGILSI NFFESFVLRH RWIMVFSSIL 120
  121 SAYIVVLVDI FQILVFHFKY HWPLNTLYDV FVLCMIYMFL PIPSIRGAAL LATSVSLMYI 180
  181 GLFIYFLKSD DEDISEVVHD LDTICVDIFH YLGFNLMGIF FRIMNDTMVR SSFLDRHQFL 240
  241 KEEMWLRQAR QQESMLLDSI LPPQIAKPIQ QSIKERIMLS ETDSDRIVVN ARRTENFMAI 300
  301 QIHPDVSILY ADVVNYTHLT TTLTVEKLVK VLHDLYGRFD MAASTFKVQR IKFLGDCYYC 360
  361 VAGLGEADPD HARMAVSLGI SMIANIQEVR AHRALDIDMR IGVHSGTLLA GVIGQAKLQY 420
  421 DIWGPDVDIA NRLEATGKPG YVHVSGRTLS SLNVAEYTVF PGTEVAQSDP ILQKQPMTTY 480
  481 LLTAAPSRNS VRSVDAVHSY AEIDINALGA SRKSPILRPT LMSDELREEF KKMPVGGFNI 540
  541 RSPCCRDNSN DEKVNHGLGM FCVAFKDSSL EWSYLHKPDF ILKYSVLLAW GIGCCLIYIQ 600
  601 IVNDKFTICV ECIVIDMVVF TFLTSLLFIS WFKKVCWWRC VENDSRKYGR VSCKLFKIWE 660
  661 RIQHSFVLRV TIYMSIVASY YLLISTILLN CDKNQYELDV INSKLYHYDI VTDNCFNPWV 720
  721 FTDMISLIVG VSYTFARIPF ALKMLITCCA TVAYLVIVFF QYSFIFEHSA TTTPFMKAEL 780
  781 AHCLRVCMML LTMYAKERQS EFNTKINFKI NQDLQGKQKA ADITNKSIII LLTNILPSHV 840
  841 VEVYLDSVAN HELYYENYKM VSVMFAMLIN FQMDLPSLRV LNDIITEFDR LLNAYKEYYV 900
  901 VEKIKVVGCT YMAACGLDFT LAKSKFGSRT HASYSSELEQ VLYRKESKGT ENDHDEVAFI 960
  961 MTTFALDLMR VLSVCNKAYA GRPFDRALST GEICIGISTG EIMAGVVGAS QPHYDIWGNP1020
 1021 VNMASRMEST GLPGHIHVTQ ETANILEQFD IMCMYRGMTF VKGRGEIPTY FVGIDDNLKF1080
 1081 LPSNVKKNNM SKRFSILSSL VPVHSRSTTS SEYI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle