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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: bun-PA
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENQSAASK DSGHQQQHQQ QQQQQHQQHQ QPLATTSVTA ASTTSVLANQ SPTNSQASSP  60
   61 ENSQEALPLL RRQQSAAAAT VAAAAATVAA TTSGTSQQQQ QQHRNSISNM FDRTVNAKFK 120
  121 PASSNAGPGN NPVRRNSMLT PSRGVTIGGT GGNIRKLTKV SSLTSNHHFA VCYPPSNIYQ 180
  181 NSNNAGSNSA LQRTTSESLR LNMMSRVAAG ATPTTVSRAS SNSSLATSTS TSLAPKSSSS 240
  241 SGGSNSTPQQ QQQQLVSSNN SSSSSNNSFT KASSPNNNGA RSVGGAATSA ATGTTAAAGS 300
  301 HHHQPHHHHH HHHHHHQHHN HQQQQQQQTS LSQGHASLTV AGGSASAGGG GGGGSGSSSG 360
  361 TAAGGTNRKP KTTSSFEITS VTVGHPKLNA AGDTGDESAD DLDESHTDDN SRITDLENET 420
  421 PSMSEDTFSK EEVYYANNAL STNAPVIPTS SQYGLVVVDP IAPSLGQTIQ NVQVNVSDNI 480
  481 INVVSGAVTP GGTKKKDDIK ETQHRSERFK VVKIESTEPF KRGRWMCMDY LDHSSVGNGG 540
  541 NNNEKTGSST SEAHAATTDG GAAGVGAGSE APAHKTTQSM ILPPTQKLNE NHLEANSTDA 600
  601 NWNYAEQQQQ QQQQQQQQQT IVGNALTKTL PVALRNVSRS SSVTRSPNAT VEFLSPNLLA 660
  661 QQQQQQQQLF DSVNANAASS PNPAGDPNNM DYARTAAMQL HQTLQQLKQR EDAMDVPPGA 720
  721 GGYANYQNGG DSAVGAASNN NSAAAATGES QLSTSYVEQQ QQQQQPLSPA PLTPQAAPTF 780
  781 AAVAAGQSPN FQLEQQQQQQ QATSQIDGIV PQPFNPQQQQ QQTPQQSTAQ QAAAAANATS 840
  841 AVTAPPPQQT SNTSNAAVTT GQGQTMPLLS HMTSYEQQQP NLGAAAAAAA AGGTAATSVA 900
  901 APQAIPTLQL QSAPSTIADP QQLMVPQQQQ QQQHQEEQQQ QPQQQQQPLP PANIASASAN 960
  961 NSNLNLTNTN VVATGEATTN ALTLTDEQAT AALAAAFATG AAAAATGATS AAAATQQQIQ1020
 1021 QLQQQPNAES ETESASGTSA VAIDNKIEQA MDLVKSHLMI AVREEVEVLK ERISELMDKI1080
 1081 NKLELENSIL KSNIPQETLQ QLQLQLQLAA PPATPAIQAA PAVQSVVAPA AAGQAVQQQA1140
 1141 AGAVAVTGVA TSPASAVVPT SIPNGSAENG SSAVESAAVS VEQQVQQVTS AAAAAASVVT1200
 1201 ANGPMS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle