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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31760-PA
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCWHNVVRR RRKKPTAAAA AKGSKGSHGG VASPRDEDAI CQRQQQVDTY TWLTTQAVPL  60
   61 LWLHLLLLVA FAKHAAAATT IATNPEATTT TVSNYTVTTT ALSSSTTTTS SGSAPALSSA 120
  121 ADKFAGNWAN LEDSFRNIVR IGDGNTVTRT SIEQSLVTIH DIATENLGTL CISTLYRPLQ 180
  181 VPINSERYES SRQKTDLAAS ILQEVGIIRH GGLSDALAKG LLTDDFITGA RILALNLTNG 240
  241 AVQSYVWWVK GTAAEIQRYD EDGLQIGKKP AGSYPWFDDE TSSPTLRSPK FAPSPPNNYY 300
  301 KGWWTYPYFS CSQSRWLVSY SIAIPPIGRH GLRGFISIDI DVSTLRVNQC EAEPYPFGSR 360
  361 RQKMQQLQTH NRLGARRSLF LGSRMGAIDE STINDLQAFH SSHKCHRTSM VCDYRQPSAE 420
  421 TPTVTGGKLL TTLTGSSSWT RGSYQCLCRG GFYSLRHPDG FNGTIMEIAW QEQQDNISNY 480
  481 YSEVFKCLPC APGCDTCTGP EPCLANYHWP FRISLLTISI GCACGTFVLA GYLFRHRRVK 540
  541 VFKVASPIFL MITLIGCAIM YLEMVAIFPY LDTTWCIATK WTRHMGFCIT YTSLLMKTWR 600
  601 VSLTYRVKSA HKIKLNDQQL LQWMVPILLV MLIYLGTWTI SATPTAEVIL DQSQLKFKQC 660
  661 SYNWWDHSLA IGEVFFLAWG IRVCYNVRNA ESLYNEARLI SYAIYNIALV NIAMVVFHVM 720
  721 LFPNAGPDYK YMLGFVRTQL STTTTIALVF GPKILRVFKG QGDKWDQKAK VRSITASFSL 780
  781 NGVGLVPEES PDLYQENEEL KEQVQKLAHQ IEFMKTVHMQ MNNRHLKPKP GGYFTITSTS 840
  841 FQAPYSKNTV STAQTQTGKD ENSVKDCSIE IDGGQGRTTL VEDAIEFNFH LADTEKGLIV 900
  901 QEDERPGSDE EEAALIAQFR RLFAPILDDS LNLYYQLNDL DDTEHVRIHQ TVAQMNDLTS 960
  961 SEEETMVTQV NSPSPPPVGV ELLLPISSDS STASSSLYAI HTPSPAHPSG VLLMPQNLES1020
 1021 PLLSGSDAIT ITEQVELHNP PHHLQLLEDE NNTSCSLSSN LTDSKTLDGR TPIVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle