YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG6415-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRLSYRLPA ALGGLRHASS AAGEGQRTAL YDFHVQKGGK IVNFGGYALP VQYSDQSIIA  60
   61 SHLHTRQVGS IFDVSHMLQS RIFGKDAAAC LESVCTADIL GTPEGSGSLT VFTNEAGGIL 120
  121 DDLIVNKVSE KELYVVSNAA MKEQDMGIMK TAVDNFKSQG KDVSIEFLTP ADQSLVAVQG 180
  181 PQVAKELSKL LTGKASLDQL YFMSSFVTTL AGIPNVRITR CGYTGEDGVE ISVASSQAQK 240
  241 LTESLLESGV LKLAGLGARD SLRLEAGLCL YGSDIDSKTT PVEAALAWLV TKRRRTTRDF 300
  301 PGADVILGQL KEGVSRRRVG LQMLGTKPPP ARSGVAIFSQ GQQVGQVTSG CPSPSAGRNI 360
  361 AMGYVAENLK APGTKVEFKV RDKLYEAEVT KMPFVKANYY NRPKK

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	405	0.99