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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG8475-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.48
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDVPKSLGL SVTTPGGSSG APDSGRHNSL EEINLDQFLK TSNYEDTVKQ LDIYYGIVKR  60
   61 QLLRYQSPIT GLFPVMSTDQ VVGSVRDSVY CASAVWSLYQ AYRRIDDDRG KSYELGQSTV 120
  121 KCMRGILECW VKQASRVELF KQRQSNQHAL HSKFQLHTGE KIYPDEFYNH LQIDCVSLYL 180
  181 LFLVQMITSG LQIIYTHDEV AFVQNLVYYV ERAYRTPDFG MWERGSKYNN GTPEIHASSI 240
  241 GMAKSALEAI NGCNLFGEKG ASWSVVYVDI DAHNRNRSIF ETMLPRESSS KGVDASLLLT 300
  301 LSFPAFASHE DRLVEQTKQN VVNRLRCKMG FKRFTRDGFL SKNEDKSRRY YHSGELKEFE 360
  361 GLECEWPLFF IAMIIDGVFK NNNEQIEEFQ NDLRRCLRTD VNGDPVVTMY YAPDGDGSYM 420
  421 RAPSQSLFLW GQSFFIIAQL LTAGLLHINE LDPIRRYLPS YNRPRRAGRY SAFQGTATDL 480
  481 VVQIVLIAES MRLQAMMATY GIQTQTPHEV EPVQIWSSTE LIKVYQHLGV NNKVGLSGRP 540
  541 CRPVGSLGTS KVYRICGMTV LCYPLIFEVS DFYLYRDMAL LIDDIKTELQ FVGKYWRLSG 600
  601 RPTVCLLIRE EHMRDPQFKE MLDLLAMLKK GYCDGMKVRI GRLQNLISSS CIEHLDFMNQ 660
  661 SDLTDNENAF SQINHEYIGY QSLTDVPKAL TYVEEKISVA HFDTKPTPDI INALRSTDSI 720
  721 YCLCQLWGII LNREGPHFEV NGLNVNTALT QLYHRAGSLR YWRAVRYCSS LLHHIVDSIS 780
  781 PFITTVLVNG KELTVGIIGQ KETVFDKPMT PAEIQNVMYT SVQPYDVIQA VLQQEVVLYC 840
  841 GRLIATNPSM FRGILKIRIG WVLEAMRIYL QISGQQSIDV DNLSPFQVRI LLQKVLTVSE 900
  901 WAVEEKLTTL QRRQLEGCLC RVPKHFYNKI WEILQRTPQG ILTQGHHLPA TPTLTNMSRG 960
  961 ELTFNLLVEE TLICIDRPER RQITVELLCI VATILNRNPE LHFKQALDLD GILAEAFAMY1020
 1021 CKDNNIQHQP KPEHEQTKNE DLKAFYSLPY SETTGYLARA AVNKVLQGGI FSTNEEDVQL1080
 1081 DGDRLHDDNC KVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle