YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310480, CG7...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.46
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGKQRIWQT SVLGLLLASF SLFSVLYMEQ IERWMLEWFM VLRPGTMISS LWQSPAMDIN  60
   61 VDLYIFNWTN SEKFSDPTVK PRFEELGPYR FTERMQKVNV EWHDENSTVS YRRRSRFDFD 120
  121 PKLSVGRPTD PIVAPNLLIV GLYQKMVMWS PMLRSLMLLA LNIYGKEQAM IRPASDWMFD 180
  181 GFDTPMIKMS KMVPPSLVPE MKFPYEKIGY AYPRNGSMEI YGHHNVYTGR DEFQKLGQIA 240
  241 RWRYNNVTEA SPRCKLKGSA GEFHPIPLVK GRPISYFLPD LCRELQVDYS GTTIFEGIDA 300
  301 FVYRGSARNM ANGTDNPDNS CYCQDNCQEV RSGLLNISSC WYGTPVFASY PHFFKADPYY 360
  361 GEQVEGMKPD KDRHEMVIML EPKTGMVLEI KARIMANLLV EPKTHLIYRT ARRTFFPLIW 420
  421 ADYNVRITDD LLVYVKLMPI LEFVGKICGI LGVVLGLLMV FWYPHQMIWQ KSLMHKIEIS 480
  481 SIETNSSLEP VKNNDVEDSP LLKGLQYAAA KDGAGNGN

Type	Start	End	Confidence
Signal Peptide	1	24	0.48
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	442	0.75
Transmembrane Helix	443	465	0.86
Cytoplasmic	466	518	0.68