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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TepII-PE
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIFLTGII LQYALLVNAT GIYSVVGPGT LRSNSKYNVV VSVHKADGPS QIKVSLNGPS  60
   61 YNETKQIELP PMSTQNVEFE VPKLATGNYN LSAEGVSGVV FKNSTKLNYA DKKPSVFVQT 120
  121 DKATYKPADL VQFRILFLDE NTRPAKIEKP ISVIIIDGAQ NRIKQLSDVK LTKGVFSGEL 180
  181 QLSEQPVLGT WKISVSVDGD NRETKSFEVD KYVLPKFEVI VDTPKAVVIA DKVIKATIRA 240
  241 KYTYGKPVKG KATVSMERSY GYFGDLNANG NKQEKTIDVD GKGHVEFDII HWAQRGQYLP 300
  301 PIKLFAVVTE ELTGNKQNAT ATVVLHQQRY SIEPYERPEH FEANKSFIYQ VVVKNVDGSP 360
  361 VTNSAKNVKI GFDKSYSYFH EPSPKTRINF EAPVNENGIA TFNVRLPDSD SRYYRIFASF 420
  421 DGSENTIGSI SKFEPTPMSR EPLKIQVNTK KPRLGEQVSF DVVSIEDLPY FVYTIVARGN 480
  481 VILSDYVDVP DGQKTYTVKF TPTFSMVPKA TIYVYYVVNN DLQFEEKTID FEKEFSNSID 540
  541 VSAPTNAKPS EEVKLRIKTD ADSFVGLLGV DQSVLLLKSG NDLSQDDIFN SLNIYQTSTP 600
  601 WMNGYGRYPG QTSGLVTLTN ANYPYNTEDS ISYDEVDAIS ITSSTKIELV RTNFAEVWMW 660
  661 TTSDNGSVGE EEFTLTKKIP DTITSWVVTG FSLNPTSGIA LTKNPSKIRV FQPFFVSTNL 720
  721 PYSVKRGEVI AIPVVIFNYL DKTLDADVVM DNSDQEYEFT EATNEVLEKA IDEVRRVKRV 780
  781 TIPANSGKSV SFMIRPKNVG FTTLKITATS ALAGDAIHQK LKVEPEGVTL FENRAVFINL 840
  841 KDQPEMSQSL DADIPNEVVP QSEFIEFSVV GDLLGPTLQN LDNLVRMPYG CGEQNMVNFV 900
  901 PNILVLKYLE VTGRKLPSVE SKARKFLEIG YQRELTYKHD DGSYSAFGKS DASGSTWLTA 960
  961 YVMRSFHQAG TYTDIDPKVI TAGLDFLVSK QKESGEFPEV GKLFDNANQN PLALTSFVLL1020
 1021 AFFENHELIP KYQSAIKKAV RYVAEEADKT DDQYSLAIAA VALQLAKHPQ SEKVIAKLES1080
 1081 VARKENDRMW WSKATESTGE DGRVFHWKPR SNDVEITSYV LLALLEKDPA EKALPIIKWL1140
 1141 ISQRNSNGGF SSTQDTVIGL QALTKFAYKT GSGSGTMDIE FSSAGESKNT IKVNPENSLV1200
 1201 LQTHDLPKST RKVDFTAKGT GSAMVQLSYR YNLAEKEKKP SFKVTPTVKD TPNQLLIVDV1260
 1261 CAEYVPLEDA DKDKDSNMAV MEIALPSGFV GDSTSLGKIQ AVDRVKRVET KNSDSTVVVY1320
 1321 FDSLTPGDVR CLPLEASKAH AVAKQKPASV SLYDYYDTER KATEYYQVKS SLCDICEGAD1380
 1381 CGEGCKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle