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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TepII-PD
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIFLTGII LQYALLVNAT GIYSVVGPGT LRSNSKYNVV VSVHKADGPS QIKVSLNGPS  60
   61 YNETKQIELP PMSTQNVEFE VPKLATGNYN LSAEGVSGVV FKNSTKLNYA DKKPSVFVQT 120
  121 DKATYKPADL VQFRILFLDE NTRPAKIEKP ISVIIIDGAQ NRIKQLSDVK LTKGVFSGEL 180
  181 QLSEQPVLGT WKISVSVDGD NRETKSFEVD KYVLPKFEVI VDTPKAVVIA DKVIKATIRA 240
  241 KYTYGKPVKG KATVSMERSY GYFGDLNANG NKQEKTIDVD GKGHVEFDII HWAQRGQYLP 300
  301 PIKLFAVVTE ELTGNKQNAT ATVVLHQQRY SIEPYERPEH FEANKSFIYQ VVVKNVDGSP 360
  361 VTNSAKNVKI GFDKSYSYFH EPSPKTRINF EAPVNENGIA TFNVRLPDSD SRYYRIFASF 420
  421 DGSENTIGSI SKFEPTPMSR EPLKIQVNTK KPRLGEQVSF DVVSIEDLPY FVYTIVARGN 480
  481 VILSDYVDVP DGQKTYTVKF TPTFSMVPKA TIYVYYVVNN DLQFEEKTID FEKEFSNSID 540
  541 VSAPTNAKPS EEVKLRIKTD ADSFVGLLGV DQSVLLLKSG NDLSQDDIFN SLNIYQTSTP 600
  601 WMNGYGRYPG QTSGLVTLTN ANYPYNTEFP DYVEDDPEIY AFENNLDALP PMPAIANFPP 660
  661 DTGNTVQPVE IRKNFADVWI WQSIGRSVGE EEFTLTKKIP DTITSWVVTG FSLNPTSGIA 720
  721 LTKNPSKIRV FQPFFVSTNL PYSVKRGEVI AIPVVIFNYL DKTLDADVVM DNSDQEYEFT 780
  781 EATNEVLEKA IDEVRRVKRV TIPANSGKSV SFMIRPKNVG FTTLKITATS ALAGDAIHQK 840
  841 LKVEPEGVTL FENRAVFINL KDQPEMSQSL DADIPNEVVP QSEFIEFSVV GDLLGPTLQN 900
  901 LDNLVRMPYG CGEQNMVNFV PNILVLKYLE VTGRKLPSVE SKARKFLEIG YQRELTYKHD 960
  961 DGSYSAFGKS DASGSTWLTA YVMRSFHQAG TYTDIDPKVI TAGLDFLVSK QKESGEFPEV1020
 1021 GKLFDNANQN PLALTSFVLL AFFENHELIP KYQSAIKKAV RYVAEEADKT DDQYSLAIAA1080
 1081 VALQLAKHPQ SEKVIAKLES VARKENDRMW WSKATESTGE DGRVFHWKPR SNDVEITSYV1140
 1141 LLALLEKDPA EKALPIIKWL ISQRNSNGGF SSTQDTVIGL QALTKFAYKT GSGSGTMDIE1200
 1201 FSSAGESKNT IKVNPENSLV LQTHDLPKST RKVDFTAKGT GSAMVQLSYR YNLAEKEKKP1260
 1261 SFKVTPTVKD TPNQLLIVDV CAEYVPLEDA DKDKDSNMAV MEIALPSGFV GDSTSLGKIQ1320
 1321 AVDRVKRVET KNSDSTVVVY FDSLTPGDVR CLPLEASKAH AVAKQKPASV SLYDYYDTER1380
 1381 KATEYYQVKS SLCDICEGAD CGEGCKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle