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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: santa-maria-PB
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFWVDLFDWI MHKEMALAPD TRVYENWKSP PIDLSLDIYL YNWTNPEDFG NLSTKPILEQ  60
   61 VGPYRFIERP DKVDIHWHPE NASVTYRRRS LFYFDAAGSN GSLDDEITTL NAVALSAAAT 120
  121 AKYWPPVKRS LVDVGLKMYG AEMSVQKSID ELLFTGYNDA MIDVAMAMPI FGDEVKVPFD 180
  181 KFGWFYTRNG SADLTGVFNV FTGADQLAKL GQMHSWNYQE NTGFFDSYCG MTNGSAGEFQ 240
  241 PQHLKPGDSV GLFTPDMCRT IPLDYVETVD IEGLEGYKFS GGPRSVDNGT QYPENLCFCG 300
  301 GQCVPSGVMN ISSCRFGSPV FMSYPHFFNA DPYYPDQVEG LSPNQKDHEF YMVVQPSTGI 360
  361 PLEVAARFQV NMLVEPIQGI SLYTGIPRIF FPLVWFEQKV RITPDMADQL KVLPIVMLSG 420
  421 HIFAGICLIV GITLLCWTPV QILLASCRNR RYDLRTKTKT NGQYKSRSQF SSAEELKSKA 480
  481 STLVCEKSVK GSPDSSPLLE KGRKPTIIKS QTGESVATAS TAISDNKQD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle