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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ndae1-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKNEYIEL PWTMNSSSGD DEAPKDPRTG GEDFTQQFTE NDFEVTPPAQ RVQFILGEDV  60
   61 DDGTHVSHPL FSEMGMLVKE GDEIEWKETA RWIKFEEDVE EGGNRWSKPH VATLSLHSLF 120
  121 ELRRLLVNGS VMLDMEAQNL EVMADLVCDH MVSAGTLPPG VKDKVKDALL RRHRHQHEYA 180
  181 KKTRLPIIRS LADMRNHSSS KKKKSNSKHS RPAQNLSSIT EDMVKSPSNQ SMARPGSGTE 240
  241 LSEQQHKGNT HFMRKIPPGA EASNILVGEV DFLERTLSCF IRLSQAVVLG DLTEVPVPTR 300
  301 FVFILLGPPG SQSNFHEIGR AMATLMSDEI FHEVAYRARK RDHLLSGVDE FLDAVTVLPP 360
  361 GEWDPTIRIE PPAAIPSQEV RKRPPELPKE EVDEEEEEAR LREENGLSRT GRLFGGLIND 420
  421 IKRKAPWYIS DYKDALSMQC VASWIFLYFA CLSPIITFGG LLAEATGKHM AAMESLVSGF 480
  481 VCGMGYGFFS GQPLTILGST GPVLVFESII YEFCLKMGWD YMTFRFWIGM WVAGICIVLT 540
  541 AIDASALVCY ITRFTEENFA TLIAFIFIYK AIENVMVIGK NFPVNQGIYD CVCTPPIGSN 600
  601 ASVIDYAKYN WDSCESYNGT LVGGDCGTPP TENVFLMSVV LCAGTFLIST VLKEFKNALF 660
  661 FPSIVRQYIS DFSVLIAIFA MSFFDYSLGV PTQKLEVPNE LKPTLSTRGW LIPPFVEKNP 720
  721 WWSAIIAVFP ALLGTILIFM DQQITAVIVN RKENKLKKGC GYHLDLFILS ILIAICSMMG 780
  781 LPWFVAATVL SINHVNSLKL ESECSAPGEK PQFLGVREQR VTHILIFLTI GVSVLLTPLL 840
  841 GNIPMPVLFG VFLYMGVASL KGLQFFDRIL IMFMPAKYQP DYMFLRQVPI KRVHLFTMIQ 900
  901 LACLIILWLI KSFSQTSILF PLMLVVMIGI RKALDLVFTR RELKILDDIM PEMTKRAAAD 960
  961 DLHKLDAEVG LLARIFPWGK GSRSRVVTKP PGLDDGIVGS GGAVGAGLIT CTTSNANEKE1020
 1021 FEAQSSLLKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle