YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Pvf2-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYLNMNLVI CNLVLAFIVI TFSKTTHAYS SFPTDINSNY FDVRNSTLPM TMTTSHPQTN  60
   61 RPLARYVLPP NELHTADEDE ESSDLEPYFE DRAVQRDRSY LIRLIRRRVP RDQAPQQVIL 120
  121 QGRSLSGVHW GQGDDNHLSS DAAVDGSDDY PSDQPGDLTV LKERIAEQNS VEKLRTMKYN 180
  181 NNRTRELKKR VEAHRLMMAK EGICRVPRPE VVHITRETNT FYSPRATILH RCSDKVGCCN 240
  241 AGWTCQMKRN ETVDRVFDKV DGRSNEPIVI SMENHTECGC VKVETRRKRS PICLCPKHFK 300
  301 DFSWAGSRAQ WENEEHLELR LWERREQRCR CDCHLSDETC KRLKNGVEGF SVMERRRIQS 360
  361 GEVSPPFCNY GAYDVRNGRC PRPGLPNRNP NLQQRLQSKR QNGKS

Type	Start	End	Confidence
Signal Peptide	1	28	0.70
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	405	0.99