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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ine-PF, ine-PE, ...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENKDVSQV LNTTPDQVVI NRAPPTGLAP LRHSQLSDSG AESCYEGDEQ ARLIRSSSSR  60
   61 AHKFIIIPAT PGTPPGSGAV AGPLPFRQTS STTSLAAMAA ALHKQSPLRH TSVRTRPSSE 120
  121 VLQPGQVLAN QPTAAVSTST VTFTIDDCNE EGDAIPAAAS VPAPVTMPAI SPTPATLTCT 180
  181 TTTTMAGDSV AVSPLSMELK SRLGSHHSSM RSVVSGYLPG LSDSSGNLVG GVSMATSGLQ 240
  241 APNPLYMQPQ ASLSGSSYHF HELAGNQIYS DVTSVRSLAS IGIGSTDGRK LVIRRVPTTA 300
  301 NELFDMVNPQ TPPPLGVDDD DSYLDMSDET AQLKPRQQHW ANKMQFVLAC IGYSVGLGNV 360
  361 WRFPYMCYKS GGGVFLVPYC IILFICSIPL LFMELSVGQY TGRGPIGALG QLCPLFKGAG 420
  421 LASVVVSFLM STYYSVIIGY SIYYFFTSFK TEMPWIDCNN RWNTPDCWVP QRKGINASAP 480
  481 DTSRTPSEEF FENKVLQISG GLEYPGMMRW ELFACLICAW LMVYFATWKS IKSSAKVRYF 540
  541 TATFPFVLII ILMVRAVTLD GAAEGLRFFF RPKWSELKNA NVWINAASQN FNSLGITFGS 600
  601 MISFASYNKY NNNILRDTVA VSAVNMITSL LVGIFAFSTL GNLALEQNTN VRDVIGDGPG 660
  661 MIFVVYPQAM AKMPYAQLWA VMFFFMLLCL GLNSQFAIVE VVVTSIQDGF PRWIKRHLGY 720
  721 HEIVVLFVCV ISCLFGMPNI IQGGIYYFQL MDHYAASVTI MFLAFCQMIA IAWFYGTGRL 780
  781 SKNVKQMTGK APSFYLRSCW LVLGPCLLFA IWVLSLINYH EPTYHNGRYT YPDWAYGIGW 840
  841 MFASFSLICI PGYAVINFLR SSGDTFWERI RNTLRPNIYE CKICGEHHCE HDYPEQEQFM 900
  901 LAQEMATVYK PTNPHLLNLG QKCGYNAMQA SPSHAEAGGP CGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle