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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ed-PA, FBpp0306381
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRKTTTKGT AIVNSRSARR AATTICNFFL IALVALSSTT LADESIDTRE NADLTLKCRF  60
   61 NDKYEANDFS FFWTRWTANP AQFDNVAIGE VQLSSGYRLD FQPERGIYDL QIKNVSYNRD 120
  121 NGRFECRIKA KGTGADVHQE FHNLTVLTPP HPPVISPGNI AVATEDKPME LTCSSIGGSP 180
  181 DPTITWYREG SNTPLPATVL KGGTKDQPTN ATLSIIPRRE DDGAKYKCVV RNRAMNEGKR 240
  241 LEATATLNVN YYPRVEVGPE NPLRVERDRT AKLECNVDAK PKVPNVRWNR NGRFISSSLV 300
  301 HTIHRVSVQD AGKYTCIADN GLGKTGEQEL ILDILYPPMV VIESKTREAE EGDTVTIRCN 360
  361 VTANPAPVTI EWLKENSPDF RYNGDVLTLT SVRADHAGNY ICRAVNIMQS QGMERSERVG 420
  421 NSTVALLVRH RPGQAYITPN KPVVHVGNGV TLTCSANPPG WPVPQYRWFR DMDGEFSSTQ 480
  481 KILAQGPQYS IPKAHLGNEG KYHCHAVNEL GIGMMATIVL EIHQPPQFLA KLQQHMTRRV 540
  541 ADTDYTVTCS AKGKPAPSVK WLKDAVEILP EENLYEVQTN PDQGLNGMVT VQSQLKFRGK 600
  601 ARPNGNALVP GDRGLYTCLY QNEVNSANSS MQLRIEHEPI VLHQYNKVAF DIRETAEVVC 660
  661 KVQAYPKPEF QWQFGNNPSP LTMSSDGHYE ISTTTDNNDI YTSVLKINSL THSDYGEYTC 720
  721 RVANTLDTIR APIRLQQKGP PEKPTNLRAT EVGHNYVSLS WDPGFDGGLS KTKFFVSYRR 780
  781 VAMPREEQLI PDCATLANSN SAWVEVDCQR DIPCKVTALE QHQSYAFKVK ALNPKSDSPY 840
  841 SSEIMVTTKV SRIPPPLQVT YEPNTRTLGI DVGATCLNLV AVVESMVNAD SPMAAWEVVT 900
  901 TMDNLQLSGN GPTHKEKIID RIIGARRVGG GRALGHTISE DEDDNGLNSL ALEDENSPTV 960
  961 RVKLCLRTNP EHCGDYTDAE IGRPYIAEAN ALATPTLIAI IVSCVVFALF AGLILMFCRC1020
 1021 KRNQSKKSAA AKDYEMDSVR PSIVAAQQNQ APPPYYPASG LDNKALEHSM DLALSMEDQK1080
 1081 TALYATQNGY SYHPGSGVVG VGMGGGVVGV GVGGSVVSGM GGGVGGIGGS GVGVNGIPGL1140
 1141 SAHTMPGNEW VNMGYMENNY SNSNNGGSVN SQDSLWQVKM SAAAVGNQQG MVQAPMNQYV1200
 1201 EQQPAYGYDP LTHGGYGAVD DYAPYPHLTA TPSQVGDEYH NLRNSQNPSR QDYCSDPYAS1260
 1261 VQKPKKRVDQ HLDSPYHDVS GLPNPYNMEH LEQDEVLPPQ QHMSLSYDDS FEGEYSTTPN1320
 1321 ARNRRVIREI IV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle