YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220952076
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPVFAFLLL ALICFASTKS ESDFEEDDSD DFAEFDDGNF YAEPAAKNAD SFSGGAGSSH  60
   61 GESRDDPPAK EPRKQAQNQE SDEEDGLVED DDEFEHFQDE EEFEGYDGGD SKDPPIDQKV 120
  121 EPKLNIPNIP LHFRTHWDSY WMEMLMVAGL LAYFANFFAG KAKNARLAQL WFSTHRALLD 180
  181 ENFALVGDDG KAENENPGLI KESESLYTLW CSGRTCCEGM LVELKMIKRQ DLVSLVAGLM 240
  241 RPQLDQAHIK IELTRGVMDA FVFAVGTKKT ITKLFKEYTD LSKFCSLVGK PEDRYNVPTG 300
  301 FGVLSEIPEA TSAILESRII TALNKYQSYI DYLHISDQFS GPIQQEEGGT LKQPETKAVL 360
  361 LAGFNLPKHA EMETIKPLLL LIFYLMERLK TYRMSKEGKA KSDKNRQRVE EEFLKSTHAA 420
  421 RAEAAAQRRE DKRKQEKERI LADEDPEKQR RWEAKEQKRQ AKRNAPKMKR LAVKSL

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	476	0.89