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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lea-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLCEMRGMP LRLQPQCLTN ESEIQIKIKS KIKNKTASEI KRRHRNNRDF HGERLKIMPV  60
   61 DRSRRAVFPL LLLLAGLNGL TQVGALKGEN PRIIEHPMDT TVPKNDPFTF NCQAEGNPTP 120
  121 TIQWFKDGRE LKTDTGSHRI MLPAGGLFFL KVIHSRRESD AGTYWCEAKN EFGVARSRNA 180
  181 TLQVAFLRDE FRLEPANTRV AQGEVALMEC GAPRGSPEPQ ISWRKNGQTL NLVGNKRIRI 240
  241 VDGGNLAIQE ARQSDDGRYQ CVVKNVVGTR ESATAFLKVH VRPFLIRGPQ NQTAVVGSSV 300
  301 VFQCRIGGDP LPDVLWRRTA SGGNMPLRRV HVLEDRSLKL DDVTLEDMGE YTCEADNAVG 360
  361 GITATGILTV HAPPKFVIRP KNQLVEIGDE VLFECQANGH PRPTLYWSVE GNSSLLLPGY 420
  421 RDGRMEVTLT PEGRSVLSIA RFAREDSGKV VTCNALNAVG SVSSRTVVSV DTQFELPPPI 480
  481 IEQGPVNQTL PVKSIVVLPC RTLGTPVPQV SWYLDGIPID VQEHERRNLS DAGALTISDL 540
  541 QRHEDEGLYT CVASNRNGKS SWSGYLRLDT PTNPNIKFFR APELSTYPGP PGKPQMVEKG 600
  601 ENSVTLSWTR SNKVGGSSLV GYVIEMFGKN ETDGWVAVGT RVQNTTFTQT GLLPGVNYFF 660
  661 LIRAENSHGL SLPSPMSEPI TVGTRYFNSG LDLSEARASL LSGDVVELSN ASVVDSTSMK 720
  721 LTWQIINGKY VEGFYVYARQ LPNPIVNNPA PVTSNTNPLL GSTSTSASAS ASASALISTK 780
  781 PNIAAAGKRD GETNQSGGGA PTPLNTKYRM LTILNGGGAS SCTITGLVQY TLYEFFIVPF 840
  841 YKSVEGKPSN SRIARTLEDV PSEAPYGMEA LLLNSSAVFL KWKAPELKDR HGVLLNYHVI 900
  901 VRGIDTAHNF SRILTNVTID AASPTLVLAN LTEGVMYTVG VAAGNNAGVG PYCVPATLRL 960
  961 DPITKRLDPF INQRYPINQD HVNDVLTQPW FIILLGAILA VLMLSFGAMV FVKRKHMMMK1020
 1021 QSALNTMRGN HTSDVLKMPS LSARNGNGYW LDSSTGGMVW RPSPGGDSLE MQKDHIADYA1080
 1081 PVCGAPGSPA GGGTSSGGSG GAGSGASGGD DIHGGHGSER NQQRYVGEYS NIPTDYAEVS1140
 1141 SFGKAPSEYG RHGNASPAPY ATSSILSPHQ QQQQQQPRYQ QRPVPGYGLQ RPMHPHYQQQ1200
 1201 QHQQQQAQQT HQQHQALQQH QQLPPSNIYQ QMSTTSEIYP TNTGPSRSVY SEQYYYPKDK1260
 1261 QRHIHITENK LSNCHTYEAA PGAKQSSPIS SQFASVRRQQ LPPNCSIGRE SARFKVLNTD1320
 1321 QGKNQQNLLD LDGSSMCYNG LADSGCGGSP SPMAMLMSHE DEHALYHTAD GDLDDMERLY1380
 1381 VKVDEQQPPQ QQQQLIPLVP QHPAEGHLQS WRNQSTRSSR KNGQECIKEP SELIYAPGSV1440
 1441 ASERSLLSNS GSGTSSQPAG HNV

YRC Informatics Platform - Version 3.0
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