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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Lsp1beta-PA, FBp...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAIALLAC LGLAAAASFH QTHEVKIADK AFLMKQKFLF EIVYRVEDPL MFEDHIKQGE  60
   61 KFYFEESYYT HYDMYMKKFF EAYKAHALLP KGEFFGALVM SHAKQARGLF NFFYYAKDWE 120
  121 TFAANVAWAR MHVNEGMFVY ALTMAVIHRN DFHGLMLPSI YEIFPQFFFN SKFVFEAEKF 180
  181 DYEMWMKMTM YEKEYMDVYY KTNGYDYSTM YRSSDYTYMK DFKTWQWWKL MGLGEHWYTE 240
  241 DKFILRENIY EFNQETKWLS MMKDVKKFYM PVDYTRDLNL YNKESKLSYF TEDLGWNAYW 300
  301 YYLNMDYSFF LDGNTFDLKN DRRGEWWLYN VHQLLSRYYM ERLSHGFGEI PEFSWYQQIE 360
  361 MGYDPQLIYY NGIGYSFRKN YYEMETYANY DMLDKITGFL KRIHNIVEMG YYKTADGHTI 420
  421 DLRKPEAIEF IGNMLQGNVD AMDKMFYQFW YMLAHMYFAD ADYYQMDVYP NVMLNFETMM 480
  481 RDPMYYMFYK SIAQVYFQFM HYLPKYTKEQ LLMPGVTMKN VEVSDLTTYF DLVDFDVTNM 540
  541 LNDKMIFQDG KFVWDMSLFA RQMRLNHKPF TYTYTIESEK VEKVVIRAFL GPKFDEFGKV 600
  601 ISLAENRMNF MEIDEFYYEL KAGTNKITRK SSEFYWTVKD RTTYTELYYY TMMAFDGKYD 660
  661 FPLDISEPHC GFPDRLVLPM GWQKGMPMQM FFMVVPYVAP AHEQFSTFDY TYSCGIGSGA 720
  721 RYVDSLPFGY PFDRAIDEYE FFVPNMYFKD VSIYHADTME PYYKYKSYSN YGHFDYTFFN 780
  781 DYYTKYFKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle