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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3883-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSGASNTD ELNKSSHSKV SKKSTKSRSK SAKLELTGKN SLSASASSSI ASAVSGGVAV  60
   61 GSLPATPTHL NMVTTPTTPT SSLGNYNLFD ASFAVAGSGG HGLAGGIAGA EASGNSSRMG 120
  121 HQKSYAGFDP RSIKIFWEQH DQTDVELSQD VCARLAEDAS YKVWELINNV KIYSRHSGGV 180
  181 VTYDLVNEVL KDADVPPMLG AMDSDWDRID YDGSFYFHSD KIFELSAEFQ KEVNLCTPDD 240
  241 ADFQSICPVE DKHMDQLRQC VQSLVTAALF ADSKSQTAAV CHAFQTPLMG SIYRVIVSKM 300
  301 VQLLAFKQQD HLSQRCWRLL RACNYNATAN HNACRPEYFN LAEVLVSQLM APYETIKAPH 360
  361 VDPDPGQTTS IKMEFEEELK VEPDQCHNPE TQENPEVMGV EKQEQEPQMF PGESTMEHTI 420
  421 YKLQSEEEEL NPQPEAEHLS SYFACPVGNG LVDELCETIG QLASQSGYLH AECLFLIKRR 480
  481 LARFFEGRHV SSERDFRYIS RAVRGLIALG EYAFREFIPY IYKLRVEEIP DSLWPDLAPA 540
  541 AIFLGGHDDV YLYEWLEYGC GAALQPFLVH YARAYEKMVT RRYVKAKQPA YRIESVPGVR 600
  601 RLEWSTLAAA MCHGDDPSKA LKPKPTLCEA FPDLQSPNLQ LNCAGNIRFK FAGCRPVLLK 660
  661 PKVATVPHSE DSPSSAANGG GGGGASSDIL IAKRKLFKPL TNVRKWSPIS GYHYLRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle