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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GABA-B-R3-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNSQLRKQS AQFHGQDGFG SGYGSRISIA ATQSDSRRRR RRGVGGTSGG HLFPEAISQY  60
   61 APQTYDAVWA IALALRAAEE HWRRNEEQSK LDGFDYTRSD MAWEFLQQMG KLHFLGVSGP 120
  121 VSFSGPDRVG TTAFYQIQRG LLEPVALYYP ATDALDFRCP RCRPVKWHSG QVPIAKRVFK 180
  181 LRVATIAPLA FYTIATLSSV GIALAIAFLA FNLHFRKLKA IKLSSPKLSN ITAVGCIFVY 240
  241 ATVILLGLDH STLPSAEDSF ATVCTARVYL LSAGFSLAFG SMFAKTYRVH RIFTRTGSVF 300
  301 KDKMLQDIQL ILLVGGLLLV DALLVTLWVV TDPMERHLHN LTLEISATDR SVVYQPQVEV 360
  361 CRSQHTQTWL SVLYAYKGLL LVVGVYMAWE TRHVKIPALN DSQYIGVSVY SVVITSAIVV 420
  421 VLANLISERV TLAFITITAL ILTSTTATLC LLFIPKLHDI WARNDIIDPV IHSMGLKMEC 480
  481 NTRRFVVDDR RELQYRVEVQ NRVYKKEIQA LDAEIRKLER LLESGLTTTS TTTSSSTSLL 540
  541 TGGGHLKPEL TVTSGISQTP AASKNRTPSI SGILPNLLLS VLPPVIPRAS WPSAEYMQIP 600
  601 MRRSVTFASQ PQLEEACLPA QDLINLRLAH QQATEAKTGL INRLRGIFSR TTSSNKGSTA 660
  661 SLADQKGLKA AFKSHMGLFT RLIPSSQTAS CNAIYNNPNQ DSIPSEASSH PNGNHLKPIH 720
  721 RGSLTKSGTH LDHLTKDPNF LPIPTISGGE QGDQTLGGKY VKLLETKVNF QLPSNRRPSV 780
  781 VQQPPSLRER VRGSPRFPHR ILPPTCSLSA LAESEDRPGD STSILGSCKS IPRISLQQAT 840
  841 SGGTWKSMET AGKSRLSLGD SQEEEQQAPA NGTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle