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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: S4A10_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIKDQGAQM EPLLPTRNDE EAVVDRGGTR SILKTHFEKE DLEGHRTLFI GVHVPLGGRK  60
   61 SHRRHRHRGH KHRKRDRERD SGLEDGGESP SFDTPSQRVQ FILGTEDDDE EHIPHDLFTE 120
  121 LDEICWREGE DAEWRETARW LKFEEDVEDG GERWSKPYVA TLSLHSLFEL RSCILNGTVL 180
  181 LDMHANTLEE IADMVLDQQV SSGQLNEDVR HRVHEALMKQ HHHQSQKKLT NRIPIVRSFA 240
  241 DIGKKQSEPN SMDKNGQVVS PQSAPACAEN KNDVSRENST VDFSKGLGGQ QKGHTSPCGM 300
  301 KQRLDKGPPH QQEREVDLHF MKKIPPGAEA SNILVGELEF LDRTVVAFVR LSPAVLLQGL 360
  361 AEVPIPSRFL FILLGPLGKG QQYHEIGRSI ATLMTDEVFH DVAYKAKDRN DLVSGIDEFL 420
  421 DQVTVLPPGE WDPSIRIEPP KNVPSQEKRK TPSLPNGTAA HGGPEQHGGH SGPELQRTGR 480
  481 IFGGLILDIK RKAPFFWSDF RDAFSLQCLA SFLFLYCACM SPVITFGGLL GEATEGRISA 540
  541 IESLFGASMT GIAYSLFGGQ PLTILGSTGP VLVFEKILFK FCKEYGLSYL SLRASIGLWT 600
  601 ATLCIILVAT DASSLVCYIT RFTEEAFASL ICIIFIYEAL EKLFELSESY PINMHNDLEL 660
  661 LTQYSCNCME PHSPSNDTLK EWRESNISAS DIIWGNLTVS ECRSLHGEYV GRACGHGHPY 720
  721 VPDVLFWSVI LFFSTVTMSA TLKQFKTSRY FPTKVRSIVS DFAVFLTILC MVLIDYAIGI 780
  781 PSPKLQVPSV FKPTRDDRGW FVTPLGPNPW WTIIAAIIPA LLCTILIFMD QQITAVIINR 840
  841 KEHKLKKGCG YHLDLLMVAV MLGVCSIMGL PWFVAATVLS ITHVNSLKLE SECSAPGEQP 900
  901 KFLGIREQRV TGLMIFILMG SSVFMTSILK FIPMPVLYGV FLYMGASSLK GIQLFDRIKL 960
  961 FWMPAKHQPD FIYLRHVPLR KVHLFTVIQM SCLGLLWIIK VSRAAIVFPM MVLALVFVRK1020
 1021 LMDFLFTKRE LSWLDDLMPE SKKKKLEDAE KEEEQSMLAM EDEGTVQLPL EGHYRDDPSV1080
 1081 INISDEMSKT AMWGNLLVTA DNSKEKESRF PSKSSPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle