YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CORIN_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVSFNVRV SSVRRARCSC PGRCYLSCRV PPTTALHALN GFGRAGVLGE TAGGTVGLGP  60
   61 SGTRGFLSGS KFQASGSLKD CFGAPPAPDV LRADSSVGEG CPQKLVTANL LRFLLLVLIP 120
  121 CICALIVLLA ILLSFVGTLK KVYFKSNDSE PLVTDGEVRV PGVIHVNRYE NTGAPSMSPS 180
  181 QSIPAWTPRA PSLEDQSHGN TSTCVNITHR QCQILPYHST LAPLLPIVKN MDTEKFLKFF 240
  241 TYLHRLGCYQ HILLFGCSLA FPKCIVDGDD RHGLLPCRSF CEAAKEGCES VLGMVNSSWP 300
  301 DSLRCSQFRY HTENNSDAST ICFSLQQEHG KQSLCGGGES FLCTSGLCIS KKLQCNGYND 360
  361 CDDWSDEAHC NCSEDLFHCG TGKCLHHSLV CDGYDDCGDL SDEQNCDCNL TKEHRCGDGR 420
  421 CIAAEWVCDG DHDCVDKSDE VNCSCPSQGL VECRSGQCIP STFQCDGDED CKDGSDEENC 480
  481 SDRPTPCPGG DRGCLDSSCV ESCAGSSLCD SDSSLSNCSH CEPITLELCM NLPYNLTHYP 540
  541 NYLGHRTQKE ASISWESALF PALVQTNCYK YLMFFACTIL VPKCDVNTGQ RVPPCRLLCE 600
  601 HSKERCESVL GIVGLQWPED TDCSQFPEQS SDNQTCLLPN EDVEECSPSH FKCRSGRCVL 660
  661 GSRRCDGQAD CDDDSDEENC GCKERDLWEC PLNKQCLKHT LICDGFPDCS DSMDEKNCSF 720
  721 CQDDELECAN HECVPRDLWC DGWTDCSDSS DEWGCVTLSK NGNSSSFLTV HRSARDHHVC 780
  781 ADGWQETLSQ LACRQMGLGE PSVTELVQGQ EGQQWLRLHS SWENLNGSTL QELLVHRRSC 840
  841 PSGSEISLLC TKQDCGRRPA ARMNKRILGG RTSRPGRWPW QCSLQSEPSG HICGCVLIAK 900
  901 KWVLTVAHCF EGREDADVWK VVFGINNLDH PSGFMQTRFV KTILLHPRYS RAVVDYDISV 960
  961 VELSDDINET SYVRPVCLPS PREFLEPDTY CYITGWGHMG NKMPFKLQEG EVRIIPLEQC1020
 1021 QSYFDMKTIT NRMICAGYES GTVDSCMGDS GGPLVCERPG GQWTLFGLTS WGSVCFSKVL1080
 1081 GPGVYSNVSY FVDWIERQIY IQTFLQKKSQ G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle