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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29466777
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAAGRGCHL LPLPAARGPA RAPAASSALS PAGLCSGTAS ASSAAAGAVA MNPSSSAGEE  60
   61 RGATGGSSSS GSGAGSCCLG AEGGVDPRGA GAAAAAALEE PAAAGQKEKE EALEEKLRDL 120
  121 TFRKQVSYRK AISRTGLQHL APAHPLGLPV ANGPAIEPRA TLDWSENAVI GEHLWLETNV 180
  181 SGDLCYLGEE NCQVRFAKSA LRRKCAVCKI VVHTACIEQL EKINFRCKPT FREGGSRSPR 240
  241 ENFVRHHWVH RRRQEGKCKQ CGKGFQQKFS FHSKEIVAIS CSWCKQAFHN KVTCFMLHHI 300
  301 EEPCSLGAHA AVIVPPTWII KVKKPQNSLK ASNRKKKRTS FKRKASKRGT EQENKGRPLV 360
  361 IKPISSPLMK PLLVFVNPKS GGNQGTKVLQ MFMWYLNPRQ VFDLSQEGPK DALELYRKVP 420
  421 NLRILACGGD GTVGWILSIL DELQLSPQPP VGVLPLGTGN DLARTLNWGG GYTDEPVSKI 480
  481 LCQVEDGTIV QLDRWNLHVE RNPDLPPEEL EDGVCKLPLN VFNNYFSLGF DAHVTLEFHE 540
  541 SREANPEKFN SRFRNKMFYA GAAFSDFLQR SSRDLSKHVK VVCDGTDLTP KIQELKFQCI 600
  601 VFLNIPRYCA GTMPWGNPGD HHDFEPQRHD DGYIEVIGFT MASLAALQVG GHGERLHQCR 660
  661 EVMLLTYKSI PMQVDGEPCR LAPAMIRISL RNQANMVQKS KRRTSMPLLN DPQSVPDRLR 720
  721 IRVNKISLQD YEGLHYDKEK LREASIPLGI LVVRGDCDLE TCRMYIDRLQ EDLQSVSSGS 780
  781 QRVHYQDQET SFPRAISAQR LSPRWCFLDA TSADRFYRID RSQEHLHFVM EISHDEIFIL 840
  841 DPDMVVSQQA GTPPGMPDLV VEQASGLSDW WNPALRKRML SDSGMITPHY EDSDLKDFSH 900
  901 SRVLQSPVSS EDHAILQAVI TGDLMKLMES YKNGGSLLIQ GPGHCSLLHY AAKTGNGEIV 960
  961 KYILDHGPAE LLDMADSETG ETALHKAACQ RNRAVCQLLV DAGASLRQTD SKGKTPQERA1020
 1021 QQAGDPDLAA YLESRQNYKI IGHEDLETAV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle